CN185881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_SALA4 (Carnitine operon protein caiE OS=Salmonella agona (strain SL483) GN=caiE PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.312e-22 Identity = 58/159 (36.48%), Postives = 91/159 (57.23%), Query Frame = -2 Query: 325 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 801 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG ++ +VAA S V+ + + ++ G+PA+ LR++TD+E+ + + Y +LA Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAMIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_ECOUT (Carnitine operon protein caiE OS=Escherichia coli (strain UTI89 / UPEC) GN=caiE PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.312e-22 Identity = 61/165 (36.97%), Postives = 90/165 (54.55%), Query Frame = -2 Query: 310 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 801 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R ++D+E+ + + Y +L + HAA Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_ECOLU (Carnitine operon protein caiE OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=caiE PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.312e-22 Identity = 61/177 (34.46%), Postives = 93/177 (52.54%), Query Frame = -2 Query: 286 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 801 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R ++D+E+ + + Y +L A +H + + +E Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_ECOL6 (Carnitine operon protein caiE OS=Escherichia coli O6 GN=caiE PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.312e-22 Identity = 61/165 (36.97%), Postives = 90/165 (54.55%), Query Frame = -2 Query: 310 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 801 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R ++D+E+ + + Y +L + HAA Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_ECOL5 (Carnitine operon protein caiE OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=caiE PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.312e-22 Identity = 61/165 (36.97%), Postives = 90/165 (54.55%), Query Frame = -2 Query: 310 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 801 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R ++D+E+ + + Y +L + HAA Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_ECOK1 (Carnitine operon protein caiE OS=Escherichia coli O1:K1 / APEC GN=caiE PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.312e-22 Identity = 61/165 (36.97%), Postives = 90/165 (54.55%), Query Frame = -2 Query: 310 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 801 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R ++D+E+ + + Y +L + HAA Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_ECO81 (Carnitine operon protein caiE OS=Escherichia coli O81 (strain ED1a) GN=caiE PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.312e-22 Identity = 61/177 (34.46%), Postives = 93/177 (52.54%), Query Frame = -2 Query: 286 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 801 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R ++D+E+ + + Y +L A +H + + +E Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_ECO45 (Carnitine operon protein caiE OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=caiE PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.312e-22 Identity = 61/165 (36.97%), Postives = 90/165 (54.55%), Query Frame = -2 Query: 310 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 801 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R ++D+E+ + + Y +L + HAA Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_ECO27 (Carnitine operon protein caiE OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=caiE PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.312e-22 Identity = 61/177 (34.46%), Postives = 93/177 (52.54%), Query Frame = -2 Query: 286 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 801 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R ++D+E+ + + Y +L A +H + + +E Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
BLAST of CN185881 vs. ExPASy Swiss-Prot
Match: CAIE_ECO7I (Carnitine operon protein caiE OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=caiE PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.244e-22 Identity = 61/177 (34.46%), Postives = 93/177 (52.54%), Query Frame = -2 Query: 286 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 801 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R ++D+E+ + + Y +L A +H + + +E Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAISFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181 The following BLAST results are available for this feature:
BLAST of CN185881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185881 ID=CN185881; Name=CN185881; organism=Citrus sinensis; type=EST; length=826bpback to top |