CN185880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL1_ARATH (Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.231e-83 Identity = 153/215 (71.16%), Postives = 170/215 (79.07%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQ--------------------------PERTTGVAFRGRSYRLSD 689 +WRLITN FFLG FSINFGIRLLMIARYGV LEKGPFERRTADFLWMMIFG+ +LLVLS IP F + FLG+SLVFML+Y+WSREFPN+ I++YGLVTLKAFYLPWAMLALDVIFGSP++PDLLGIIAGHLYYFLTVLHPLATGKN LKTPKWV K+VARWRIGAP + Q P ++ AFRGRSYRL+D Sbjct: 52 IWRLITNLFFLGGFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSFTLLVLSVIPFFWTPFLGVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDLLGIIAGHLYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGAAGPGAGGGVGGGGAYSSARAPPESSNTAFRGRSYRLTD 266
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL1_ORYSJ (Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2) HSP 1 Score: 281.952 bits (720), Expect = 2.236e-75 Identity = 138/190 (72.63%), Postives = 157/190 (82.63%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQP--ERTTGVAFRGRSYRLS 686 +WRL T+FFFLG FSINFGIRLLMIARYGV LEKG FE+RTADFLWMMIFGA+SLL LSAIP YFLG+ +V ML+YVWSRE+PNSQI++YGLV L++FYLPWAML LDVIFGS ++P LLGI+ GH YYFL+VLHPLATGKN LKTP WV K+VAR+RIG A +P T AFRGRSYRLS Sbjct: 52 IWRLFTSFFFLGKFSINFGIRLLMIARYGVQLEKGAFEKRTADFLWMMIFGAISLLALSAIPFLDIYFLGVPMVSMLLYVWSREYPNSQISMYGLVQLRSFYLPWAMLGLDVIFGSEILPGLLGILVGHTYYFLSVLHPLATGKNYLKTPMWVHKIVARFRIGVQANAPVRPAAANTGSGAFRGRSYRLS 241
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DER12_MAIZE (Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.893e-74 Identity = 140/192 (72.92%), Postives = 157/192 (81.77%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIG----APAINRAQPERTTGVAFRGRSYRLS 686 VWR+ T+FFFLG FSINFGIRLLMIARYGV LEKG F++RTADFLWMMIFGA+SLLVLS IP +Y LG+ +V MLVYVWSRE PN+QINIYG++ LKAFYLPW ML LDVIFGSPL+P LLGI+ GHLYY+ VLHPLATGKN LKTPKWV K+VAR+RIG AP A TG AFRGRSYRL+ Sbjct: 52 VWRIFTSFFFLGPFSINFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSVIPQLNTYVLGLPMVSMLVYVWSRENPNAQINIYGILQLKAFYLPWVMLLLDVIFGSPLMPGLLGIMVGHLYYYFAVLHPLATGKNYLKTPKWVHKIVARFRIGMQANAPVRAPANGNAGTG-AFRGRSYRLN 242
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DER11_MAIZE (Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2) HSP 1 Score: 276.174 bits (705), Expect = 1.227e-73 Identity = 137/192 (71.35%), Postives = 160/192 (83.33%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQPERT----TGVAFRGRSYRLS 686 +WRL+T+FFFL FS+ FGIRLLMIARYGV LEKG F++RTADFLWMMIFGA+SLLVLS IP+F S+FLGI +V ML+YVWSRE PN+QINIYGLV L++FYLPWAML LDVIFGS L+P LLGI+ GHLYYF VLHPLATGK+ LKTPKWV K+VAR+RIG A + +P +GV FRGRSYRL+ Sbjct: 52 IWRLLTSFFFLAPFSMKFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSIIPLFNSFFLGIPMVSMLLYVWSRENPNAQINIYGLVQLRSFYLPWAMLLLDVIFGSSLMPGLLGIMVGHLYYFFAVLHPLATGKSYLKTPKWVHKIVARFRIGMQANSPVRPPANGNSGSGV-FRGRSYRLN 242
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL3_BOVIN (Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.373e-32 Identity = 70/158 (44.30%), Postives = 102/158 (64.56%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 593 VWRLITNF F G +F +L + RY LE+G F RTADF++M +FG + + +L + +FLG +L MLVYVWSR P ++N +GL+T +A +LPWA++ L ++ G+ ++ DLLGI GH+YYFL + P GK LL TP +++ L+ Sbjct: 54 VWRLITNFLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL--FFLGQALTAMLVYVWSRRSPGVRVNFFGLLTFQAPFLPWALMGLPMLLGNSILVDLLGIAVGHVYYFLEDVFPNQPGGKRLLLTPSFLKLLL 209
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL3_HUMAN (Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.793e-32 Identity = 68/158 (43.04%), Postives = 103/158 (65.19%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 593 VWRL+TNF F G +F +L + RY LE+G F RTADF++M +FG + + +L + +FLG +L+ MLVYVWSR P ++N +GL+T +A +LPWA++ ++ G+ ++ DLLGI GH+YYFL + P GK LL+TP +++ L+ Sbjct: 54 VWRLVTNFLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL--FFLGQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGHIYYFLEDVFPNQPGGKRLLQTPGFLKLLL 209
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL2_DICDI (Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.058e-32 Identity = 68/161 (42.24%), Postives = 96/161 (59.63%), Query Frame = 3 Query: 126 WRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLV 593 WRL TNFFF +NF + + R+ LE+ F R+AD+L+M IFG+ LL++ A + + FL S+ FM++YVWSR PN I+ GL T A YLPW +L + +F L DLLG +AGH YYFL +PL + + LLKTP +++ L+ Sbjct: 54 WRLFTNFFFYDEIGMNFFFHMYFLVRHSRLLEESSFRGRSADYLFMWIFGSFLLLIMDAFLFYTKIVTKVLFLAPSIAFMVIYVWSRRNPNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTTDLLGAVAGHAYYFLEDAYPLISNRRLLKTPGFLKNLM 214
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DERL2_ORYSJ (Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31 Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 596 +WRL+TNF + ++F + +ARY LE+ F RTADF +M++FGA L L+ IP R FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS DLLG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 53 IWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DER22_MAIZE (Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31 Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 596 +WRL+TNF + ++F + +ARY LE+ F RTADF +M++FGA L L+ IP R FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS DLLG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 53 IWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
BLAST of CN185880 vs. ExPASy Swiss-Prot
Match: DER21_MAIZE (Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31 Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 3 Query: 123 VWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 596 +WRL+TNF + ++F + +ARY LE+ F RTADF +M++FGA L L+ IP R FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS DLLG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 53 IWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTSIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219 The following BLAST results are available for this feature:
BLAST of CN185880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185880 ID=CN185880; Name=CN185880; organism=Citrus sinensis; type=EST; length=712bpback to top |