DC900034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = -1 Query: 173 NKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 412 NK+ L PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 321 NKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 400
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB2_XENLA (Voltage-gated potassium channel subunit beta-2 OS=Xenopus laevis GN=kcnab2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.414e-12 Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = -1 Query: 173 GFAWKNYKNLANRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 472 G+ W K L+ K+ + IA+ LG L QLAIAWC N VSSV+ GA+ Q+ EN+ AI V+P L+ S++ +I+ + +KP + YR Sbjct: 269 GYQWLKDKILSEEGRRQQA--KLKEFQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLLENIGAIQVLPKLSSSIIHEIDGILGNKPYSKKDYR 366
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.765e-12 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = -1 Query: 173 KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 409 K+ L PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T ++++I+ + +KP + YR Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSNPEQLIENLGAIQVLPKMTSHIVNEIDNILGNKPYSKKDYR 400
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB3_XENLA (Voltage-gated potassium channel subunit beta-3 OS=Xenopus laevis GN=kcnab3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.677e-11 Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = -1 Query: 173 GFAWKNYKNLANRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 472 G+ W K ++ +KV L PIAD L + QLAIAWC + VSSV+ G + Q+ EN+ AI V+P LTP ++ +I+ + +KP + R Sbjct: 303 GYHWLKEKAISQEGKKQH--SKVKELHPIADRLNCTVTQLAIAWCLRSEGVSSVLLGVSNIEQLLENLGAIQVLPHLTPQLVTEIDQILGNKPNLKKDSR 400 The following BLAST results are available for this feature:
BLAST of DC900034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900034 ID=DC900034; Name=DC900034; organism=Citrus sinensis; type=EST; length=481bpback to top |