DC900034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 2.933e-40 Identity = 84/99 (84.85%), Postives = 88/99 (88.89%), Query Frame = -1 Query: 173 FAWKNYKNLANRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 469 FA +NYKNLANRSLVDD L KVN LKPIA ELGV LAQLAIAWCASNPNVSSVITGATKE+QI ENMKA+DVIPLLTP V+DKIEA V SKPKR ESYR Sbjct: 230 FALENYKNLANRSLVDDTLRKVNGLKPIASELGVSLAQLAIAWCASNPNVSSVITGATKENQIVENMKALDVIPLLTPEVVDKIEAVVQSKPKRTESYR 328
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = -1 Query: 173 GFAWKNYKNLANRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 472 G+ W K L+ K+ L+ IA+ LG L QLAIAWC N VSSV+ GA+ Q+ EN+ AI V+P L+ S++ +I++ + +KP + YR Sbjct: 269 GYQWLKDKILSEEGRRQQA--KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYR 366
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = -1 Query: 173 GFAWKNYKNLANRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 472 G+ W K L+ K+ L+ IA+ LG L QLAIAWC N VSSV+ GA+ Q+ EN+ AI V+P L+ S++ +I++ + +KP + YR Sbjct: 269 GYQWLKDKILSEEGRRQQA--KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYR 366
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = -1 Query: 173 GFAWKNYKNLANRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 472 G+ W K L+ K+ L+ IA+ LG L QLAIAWC N VSSV+ GA+ Q+ EN+ AI V+P L+ S++ +I++ + +KP + YR Sbjct: 269 GYQWLKDKILSEEGRRQQA--KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPYSKKDYR 366
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = -1 Query: 173 GFAWKNYKNLANRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 472 G+ W K L+ K+ L+ IA+ LG L QLAIAWC N VSSV+ GA+ Q+ EN+ AI V+P L+ S++ +I++ + +KP + YR Sbjct: 269 GYQWLKDKILSEEGRRQQA--KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASSADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPYSKKDYR 366
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = -1 Query: 173 NKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 412 NK+ L PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 321 NKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 400
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = -1 Query: 173 NKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 412 NK+ L PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 339 NKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 418
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = -1 Query: 173 NKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 412 NK+ L PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 328 NKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 407
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = -1 Query: 173 NKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 412 NK+ L PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 321 NKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 400
BLAST of DC900034 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = -1 Query: 173 NKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 412 NK+ L PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 339 NKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 418 The following BLAST results are available for this feature:
BLAST of DC900034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900034 ID=DC900034; Name=DC900034; organism=Citrus sinensis; type=EST; length=481bpback to top |