DC887831

Overview
NameDC887831
Unique NameDC887831
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.161e-17
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = -2
Query:  228 PVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGI-EQARLLRGTS-FVHETYGVFRTLEDLWDGE 497
            PVV  VA KL KTP QV ++W LQ G S++PKS+ + RIKEN+ VF W IPE+       I ++ R+L G   FV++T+G +R+  D+WD E
Sbjct:  228 PVVEKVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVLTGEELFVNKTHGPYRSAADVWDHE 319          
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.377e-17
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = -2
Query:  231 WIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGIEQARLLRGTSFVHETYGVFRTLEDLWDG 524
            W  + V+   V++ +A+  GKT AQ+CLRW  + G+ LL K+ NE R+KENLD+FDW + E+   K S + Q R L G  FV +  G ++ +EDLWDG
Sbjct:  225 WGSAAVMDSGVLHDIAQTKGKTLAQICLRWMYEQGDVLLVKTYNENRMKENLDIFDWELTEEERDKISKLPQQRGLTGMQFVCDN-GPYKCVEDLWDG 321          
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.283e-16
Identity = 40/100 (40.00%), Postives = 65/100 (65.00%), Query Frame = -2
Query:  225 WIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGIEQARLLRGTSFVHETYGVFRTLEDLWDGEI 524
            W  + V+   V+  +A   GKT AQ+CLRW  + G+ LL K+ NE R+KENLD+F+W + ++   + S + Q R L G  F+ + +G ++++EDLWDG++
Sbjct:  223 WGSAAVMDSGVLQEIAGAKGKTLAQICLRWLYEQGDVLLVKTYNEKRMKENLDIFNWELTDEERERISQLPQLRGLPGLEFISD-HGPYKSVEDLWDGDV 321          
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.505e-12
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = -2
Query:  297 KSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGIEQARLL 518
            +  +L HP V  VAE  GKT AQ  +RW +Q+GN ++PKS N  RI+ N DVFD+ + E  +A  S +E A  L
Sbjct:  192 QGSLLAHPTVTGVAESHGKTAAQALIRWHMQLGNIVIPKSVNPQRIESNFDVFDFELSEQDMASISSLEDASRL 265          
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: Y4205_MYCGI (Uncharacterized oxidoreductase Mflv_4205 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_4205 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.272e-12
Identity = 29/73 (39.73%), Postives = 50/73 (68.49%), Query Frame = -2
Query:  294 DVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGIEQARLLR 512
            ++L H  VN +AE  G+TPAQV +RW LQ+GN ++P+S++  RI+ N+DVF + + E+ ++  +G++     R
Sbjct:  198 NLLSHSAVNAIAEAHGRTPAQVLIRWSLQLGNIVIPRSSSPERIRSNIDVFGFELSEEQMSTLNGLDDGTRFR 270          
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = -2
Query:  309 VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGIEQ 509
            + +H +V  +AEK G+TPAQV LRW  Q G +++PKS N  R+K+NLDV  W++ E+ +   SG+++
Sbjct:  236 LFEHQLVKSIAEKHGRTPAQVLLRWATQRGIAVIPKSNNPQRLKQNLDVTGWNLEEEEIKAISGLDR 302          
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.287e-12
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = -2
Query:  297 KSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGIEQARLL 518
            +  +L HP V  VAE  GKT AQ  +RW +Q+GN ++PKS N  RI+ N DVFD+ + E  +A  S +E    L
Sbjct:  192 QGSLLAHPTVTGVAESHGKTAAQALIRWHMQLGNIVIPKSVNPQRIESNFDVFDFELSEQDMASISSLEDGSRL 265          
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.769e-11
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = -2
Query:  294 VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGIEQARLLR 509
            +L H  V  VA+  GKTPAQV LRW +Q+GN ++ +S N  RI  NL+VFD+ + +D +A  +G+++    R
Sbjct:  203 LLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLNGLDEGTRFR 274          
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.769e-11
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = -2
Query:  294 VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGIEQARLLR 509
            +L H  V  VA+  GKTPAQV LRW +Q+GN ++ +S N  RI  NL+VFD+ + +D +A  +G+++    R
Sbjct:  203 LLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLNGLDEGTRFR 274          
BLAST of DC887831 vs. ExPASy Swiss-Prot
Match: Y2161_MYCVP (Uncharacterized oxidoreductase Mvan_2161 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_2161 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.723e-11
Identity = 29/72 (40.28%), Postives = 47/72 (65.28%), Query Frame = -2
Query:  294 VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPEDLLAKFSGIEQARLLR 509
            +L +P V  +A+   +TPAQV +RW LQ+GN ++ +S++  RIK NLDVFD+ +  D +A   G+++    R
Sbjct:  199 LLSNPAVTAIADAQDRTPAQVLIRWSLQLGNVVISRSSSPERIKSNLDVFDFELTADQMAALDGLDEGTRFR 270          
The following BLAST results are available for this feature:
BLAST of DC887831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ALDR_HORVU1.161e-1747.83Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
NADO2_ORYSJ3.377e-1744.90Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
NADO1_ORYSJ1.283e-1640.00Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
Y1919_MYCSJ2.505e-1245.95Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
Y4205_MYCGI4.272e-1239.73Uncharacterized oxidoreductase Mflv_4205 OS=Mycoba... [more]
XYL1_ASPNG5.579e-1244.78NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]
Y1985_MYCSK7.287e-1244.59Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
Y1984_MYCSK2.769e-1143.06Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS2.769e-1143.06Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]
Y2161_MYCVP4.723e-1140.28Uncharacterized oxidoreductase Mvan_2161 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionDC887831 EIC Citrus sinensis cDNA clone EIC0964 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887831 ID=DC887831; Name=DC887831; organism=Citrus sinensis; type=EST; length=528bp
TAGAACCCTTCGATGCTGTTAGCACATATCATGGCCTTCGATATAAGTAA
GTTTGGAACATTCAGAGTAAAAGCGAGATAAATCTGAAACTGCAAATTGT
TCTCCAAATGGTTTAAAATTATTAAGCACAAAGAATAACTGCGAAGTTAA
ACACAGTTTCAACATCCATCACGGCTATGCTTAAGACTTTTCCTTCTGAA
TACTGATTGTTGTCGTATTGCTCATATCTCACCGTCCCATAAATCTTCAA
GAGTCCTGAATACACCATAAGTTTCATGGACAAAGGAAGTCCCTCTTAGA
AGTCTAGCCTGCTCAATTCCTGAAAACTTGGCTAGTAAGTCCTCAGGTAT
GGACCAGTCAAAGACATCCAAGTTCTCCTTGATCCGTACTTCATTTGTGC
TCTTGGGAAGCAAACTGTTACCCATTTGCAGACCCCAGCGGAGACAAACT
TGTGCGGGAGTTTTGCCTAATTTCTCAGCAACCATATTCACAACTGGATG
CTTGAGGACATCACTCTTGATCCATGTT
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