CN185247
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX4_CITSI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Citrus sinensis GN=CSA PE=1 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 7.157e-68 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 370 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET Sbjct: 44 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 166
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX4_MESCR (Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.332e-57 Identity = 102/123 (82.93%), Postives = 115/123 (93.50%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLET 370 TNSNY EL++LY++YK++GLEILAFPCNQFG QEPGDNEQI EFACTRFKAEFPIFDKVDVNG NAAP+YK+LKSSKGGLFGD IKWNF+KFLVD++G VV+RYAPTTSP SIEKDIKKL+ T Sbjct: 47 TNSNYPELTKLYEQYKDKGLEILAFPCNQFGNQEPGDNEQIMEFACTRFKAEFPIFDKVDVNGSNAAPVYKYLKSSKGGLFGDGIKWNFTKFLVDRDGKVVDRYAPTTSPASIEKDIKKLIGT 169
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX6_ARATH (Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana GN=GPX6 PE=2 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 1.266e-56 Identity = 101/121 (83.47%), Postives = 112/121 (92.56%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 364 TNSNYTEL+QLY+KYK G EILAFPCNQFG QEPG NE+I +FACTRFKAE+PIFDKVDVNGD AAP+YK LKSSKGGLFGD IKWNF+KFLVDK+GNVV+R+APTTSPLSIEKD+KKLL Sbjct: 108 TNSNYTELAQLYEKYKGHGFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDKAAPVYKFLKSSKGGLFGDGIKWNFAKFLVDKDGNVVDRFAPTTSPLSIEKDVKKLL 228
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 6.285e-56 Identity = 98/121 (80.99%), Postives = 112/121 (92.56%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 364 TNSNYTE+++LY+KY+ GLEILAFPCNQFG QEPG NE++ EFACTRFKAE+PIFDKVDVNG NAAP+YK LKSSKGGLFGD +KWNF+KFLVDK+GNVV+RYAPTTSP SIEKD+KKLL Sbjct: 47 TNSNYTEMTELYEKYRELGLEILAFPCNQFGNQEPGSNEEVLEFACTRFKAEYPIFDKVDVNGSNAAPIYKFLKSSKGGLFGDGLKWNFTKFLVDKDGNVVDRYAPTTSPKSIEKDVKKLL 167
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 6.285e-56 Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 364 TNSNYT+L+++Y KYK+QGLEILAFPCNQFG QEPG E+IQ CTRFKAE+PIFDKVDVNGDNAAPLYK LKSSKGG FGDSIKWNFSKFLVDKEGNVV+RY+PTT+P S+EKDIKKLL Sbjct: 46 TNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLL 166
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX4_TOBAC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 1.072e-55 Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 364 TNSNYT+++++Y KYK+QGLEILAFPCNQFG QEPG E+IQ CTRFKAE+PIFDKVDVNGDNAAPLYK LKSSKGG FGDSIKWNFSKFLVDKEGNVV+RY+PTT+P S+EKDIKKLL Sbjct: 46 TNSNYTDMTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLL 166
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX4_SOLLC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Solanum lycopersicum GN=GPXle-1 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 6.948e-55 Identity = 97/121 (80.17%), Postives = 111/121 (91.74%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 364 TNSNYT++++LY KYK+QGLEILAFPCNQFG QEPG+ E IQ+ CTRFKAE+PIFDKVDVNGDNAAPLY+ LKSSKGG FGD IKWNFSKFL+DKEG+VV+RY+PTTSP S+EKDIKKLL Sbjct: 46 TNSNYTDMTELYKKYKDQGLEILAFPCNQFGGQEPGNIEDIQQMVCTRFKAEYPIFDKVDVNGDNAAPLYRFLKSSKGGFFGDGIKWNFSKFLIDKEGHVVDRYSPTTSPASMEKDIKKLL 166
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX4_GOSHI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 1.185e-54 Identity = 100/122 (81.97%), Postives = 110/122 (90.16%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD-NEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 364 TNSNYT+L+++Y KYK+QGLEILAFPCNQFG QEPG E IQ CTRFKAE+PIFDKVDVNGDNAAPLYK LKSSKGG FGDSIKWNFSKFLVDKEGNVV+RY+PTT+P S+EKDIKKLL Sbjct: 46 TNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEESIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLL 167
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX4_HELAN (Probable phospholipid hydroperoxide glutathione peroxidase OS=Helianthus annuus GN=GPXHA-2 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 4.980e-53 Identity = 97/121 (80.17%), Postives = 106/121 (87.60%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 364 TNSNY EL+ LY KYK+QG EILAFPCNQFG QEPG NE+IQ FACTRFKAE+P+F KV+VNG A PLYK LKSSKGG GDSIKWNF+KFLVD+EG VV+RYAPTTSPLSIEKDIKKLL Sbjct: 57 TNSNYPELTTLYQKYKDQGFEILAFPCNQFGGQEPGSNEEIQVFACTRFKAEYPVFSKVNVNGKEADPLYKFLKSSKGGFLGDSIKWNFTKFLVDREGKVVDRYAPTTSPLSIEKDIKKLL 177
BLAST of CN185247 vs. ExPASy Swiss-Prot
Match: GPX1_PEA (Phospholipid hydroperoxide glutathione peroxidase, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 6.087e-51 Identity = 91/121 (75.21%), Postives = 104/121 (85.95%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 364 T+SNYTELS LY+ +KN+GLE+LAFPCNQFG QEPG NE+I++FACT+FKAEFPIFDKVDVNG AP+Y+ LKSS GG FGD +KWNF KFLVDK G VVERY PTTSP IEKDI+KLL Sbjct: 114 TSSNYTELSHLYENFKNKGLEVLAFPCNQFGMQEPGSNEEIKQFACTKFKAEFPIFDKVDVNGPFTAPVYQFLKSSSGGFFGDIVKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLL 234 The following BLAST results are available for this feature:
BLAST of CN185247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105 ZOOMx 1POSITION0
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185247 ID=CN185247; Name=CN185247; organism=Citrus sinensis; type=EST; length=430bpback to top |