CN185079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_DICDI (Nuclear transcription factor Y subunit beta OS=Dictyostelium discoideum GN=nfyB PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.203e-38 Identity = 78/115 (67.83%), Postives = 96/115 (83.48%), Query Frame = 1 Query: 118 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME--GDTKGNAKGGDASAKKDGQP 456 REQDRYLPIANI RIMKKALP N K+AKDAKETVQ+CVSEFISFITSEASDKCQ+EKRKTING+D++ AM +LGFE+Y++PLK+YL +YRE E + K + K ++S+ + P Sbjct: 47 REQDRYLPIANIIRIMKKALPNNAKVAKDAKETVQDCVSEFISFITSEASDKCQQEKRKTINGEDIIAAMVSLGFENYVEPLKVYLLKYRETEKNSNNKRSPKKSESSSPPESPP 161
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_RAT (Nuclear transcription factor Y subunit beta OS=Rattus norvegicus GN=Nfyb PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.053e-37 Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 1 Query: 82 HESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQLAHQGSFPQGVNYGNSQ 522 HE S S REQD YLPIAN++RIMK A+P GKIAKDAKE VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK+YL ++RE KG G A + DG T+ A P G+ + Q Sbjct: 42 HEDTNGSKES-FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREA---MKGEKGIGGAVSATDGLSEELTEEAFTNQLPAGLITADGQ 184
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_MOUSE (Nuclear transcription factor Y subunit beta OS=Mus musculus GN=Nfyb PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.053e-37 Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 1 Query: 82 HESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQLAHQGSFPQGVNYGNSQ 522 HE S S REQD YLPIAN++RIMK A+P GKIAKDAKE VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK+YL ++RE KG G A + DG T+ A P G+ + Q Sbjct: 42 HEDTNGSKES-FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREA---MKGEKGIGGAVSATDGLSEELTEEAFTNQLPAGLITADGQ 184
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_HUMAN (Nuclear transcription factor Y subunit beta OS=Homo sapiens GN=NFYB PE=1 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 8.619e-37 Identity = 81/141 (57.45%), Postives = 99/141 (70.21%), Query Frame = 1 Query: 82 HESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQLAHQGSFPQGV 504 HE S S REQD YLPIAN++RIMK A+P GKIAKDAKE VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK+YL ++RE KG G A DG T+ A P G+ Sbjct: 42 HEDTNGSKES-FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREA---MKGEKGIGGAVTATDGLSEELTEEAFTNQLPAGL 178
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_BOVIN (Nuclear transcription factor Y subunit beta OS=Bos taurus GN=NFYB PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.126e-36 Identity = 82/147 (55.78%), Postives = 100/147 (68.03%), Query Frame = 1 Query: 82 HESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQLAHQGSFPQGVNYGNSQ 522 HE S S REQD YLPIAN++RIMK A+P GKIAKDAKE VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK+YL ++RE KG G A DG T A P G+ + Q Sbjct: 42 HEDTNGSKES-FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREA---MKGEKGIGGAVTATDGLSEELTDEAFTNQLPAGLITADGQ 184
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB5_ARATH (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana GN=NFYB5 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.920e-36 Identity = 74/119 (62.18%), Postives = 90/119 (75.63%), Query Frame = 1 Query: 85 ESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKG-NAKGGDASA 438 E +Q V+EQDR LPIAN+ RIMK LPAN K++K+AKET+QECVSEFISF+T EASDKC +EKRKT+NGDD+ WAMA LGF+DY LK YL RYR +EG+ + KGG S+ Sbjct: 39 EDQQQEESMMVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGKGGPKSS 157
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_HORSE (Nuclear transcription factor Y subunit beta OS=Equus caballus GN=NFYB PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.508e-36 Identity = 81/147 (55.10%), Postives = 100/147 (68.03%), Query Frame = 1 Query: 82 HESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQLAHQGSFPQGVNYGNSQ 522 HE S S REQD YLPIAN++RIMK A+P GKIAKDAKE VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK+YL ++RE KG G A DG + A P G+ + Q Sbjct: 42 HEDTNGSKES-FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREA---MKGEKGIGGAVTATDGLSEELAEEAFTNQLPAGLITADGQ 184
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_CHICK (Nuclear transcription factor Y subunit beta OS=Gallus gallus GN=NFYB PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 3.275e-36 Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = 1 Query: 82 HESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQLAHQGSFPQGV 504 HE S S REQD YLPIAN++RIMK A+P GKIAKDAKE VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK+YL ++RE KG G DG T+ A P G+ Sbjct: 40 HEDTNGSKES-FREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREA---MKGEKGIGGTVTTGDGLSEELTEEAFTNQLPAGL 176
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB6_ARATH (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana GN=NFYB6 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.729e-35 Identity = 66/107 (61.68%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 115 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDAS 435 VREQDR++PIAN+ RIM++ LPA+ KI+ D+KET+QECVSE+ISFIT EA+++CQRE+RKTI +D+LWAM+ LGF+DYI+PL +YL RYRE+EG+ + G S Sbjct: 56 VREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAGSVS 162
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_PETMA (Nuclear transcription factor Y subunit beta OS=Petromyzon marinus GN=NFYB PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.067e-35 Identity = 71/101 (70.30%), Postives = 90/101 (89.11%), Query Frame = 1 Query: 118 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYRE-MEGDTKGNA 417 REQD YLPIAN++RIMK ++P++GKIAKDAKE VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK YL +YRE M+G+ NA Sbjct: 54 REQDIYLPIANVARIMKTSIPSSGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKQYLQKYRESMKGEKGINA 154 The following BLAST results are available for this feature:
BLAST of CN185079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185079 ID=CN185079; Name=CN185079; organism=Citrus sinensis; type=EST; length=801bpback to top |