CN185079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYBA_ARATH (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana GN=NFYB10 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.080e-63 Identity = 125/154 (81.17%), Postives = 138/154 (89.61%), Query Frame = 1 Query: 82 HESG-EQSPRS-NVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQLA---HQGSFPQGVNYGNSQGS 528 HESG +QSPRS NVREQDR+LPIANISRIMK+ LP NGKIAKDAKET+QECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK+YL RYREMEGDTKG+ KGG++SAK+DGQP+ +Q + QGSF QG YGNSQGS Sbjct: 14 HESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQGSFSQG-PYGNSQGS 166
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB8_ARATH (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana GN=NFYB8 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.842e-61 Identity = 122/152 (80.26%), Postives = 134/152 (88.16%), Query Frame = 1 Query: 82 HESG-EQSPRS-NVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPN---TQLAHQGSFPQGVNYGNSQ 522 HESG +QSPRS +VREQDR+LPIANISRIMK+ LPANGKIAKDAKE VQECVSEFISF+TSEASDKCQREKRKTINGDDLLWAMATLGFEDY++PLK+YL RYREMEGDTKG+AKGGD +AKKDGQ + N +QLAHQG YGNSQ Sbjct: 15 HESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGGDPNAKKDGQSSQNGQFSQLAHQGP------YGNSQ 160
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.197e-54 Identity = 115/172 (66.86%), Postives = 129/172 (75.00%), Query Frame = 1 Query: 82 HESGEQSPRS-----NVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQ------LAHQGSFPQGVNYGNSQGSIYNYQLGDFSSI 564 HESG SPR +VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYI+PLK+YL +YREMEGD+K AK D S KKD + + QG++ QG+ Y Q Y GD S++ Sbjct: 15 HESG--SPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKDALGHVGASSSAAEGMGQQGAYNQGMGYMQPQ-----YHNGDISNV 179
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NFYB3 PE=1 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 5.941e-54 Identity = 116/178 (65.17%), Postives = 128/178 (71.91%), Query Frame = 1 Query: 82 HESGEQSPRSN------------VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKD------GQPNPNTQLAHQGSFPQGVNYGNSQGSIYNYQLGDFSS 561 HESG SPR VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYI+PLK+YL +YREMEGD+K AK GD S KKD G + + Q ++ QG+ Y Q Y GD S+ Sbjct: 15 HESG--SPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQGMGQQAAYNQGMGYMQPQ-----YHNGDVSN 185
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB1_ARATH (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana GN=NFYB1 PE=1 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 6.797e-50 Identity = 94/113 (83.19%), Postives = 103/113 (91.15%), Query Frame = 1 Query: 112 NVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDG 450 +VREQDRYLPIANISRIMKKALP NGKI KDAK+TVQECVSEFISFITSEASDKCQ+EKRKT+NGDDLLWAMATLGFEDY++PLKIYL RYRE+EGD KG+ K GD S + G Sbjct: 18 SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKSGDGSNRDAG 130
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB2_ORYSJ (Nuclear transcription factor Y subunit B-2 OS=Oryza sativa subsp. japonica GN=NFYB2 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.754e-49 Identity = 101/154 (65.58%), Postives = 121/154 (78.57%), Query Frame = 1 Query: 82 HESGEQSPRSN-VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKD------GQPNPNTQLAHQGSFPQGVNYGNSQ 522 H+ PRS VREQDR+LPIANISRIMKKA+PANGKIAKDAKET+QECVSEFISF+TSEASDKCQ+EKRKTING+DLL+AM TLGFE+Y+DPLKIYL +YRE+ GD+K ++K GD S KKD G + + Q G++ QG+ Y Q Sbjct: 20 HDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREVIGDSKLSSKAGDGSVKKDTIGPHSGASSSSAQ-GMVGAYTQGMGYMQPQ 172
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB3_ARATH (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.041e-45 Identity = 89/126 (70.63%), Postives = 101/126 (80.16%), Query Frame = 1 Query: 109 SNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME----------GDTKGNAKGGDASAKKDGQP 456 ++ REQDR+LPIAN+SRIMKKALPAN KI+KDAKETVQECVSEFISFIT EASDKCQREKRKTINGDDLLWAM TLGFEDY++PLK+YL +YRE+E GD +G GG A + G P Sbjct: 17 ASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGDKEGGGGGGGAGSGSGGAP 142
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB2_ARATH (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.162e-43 Identity = 80/98 (81.63%), Postives = 92/98 (93.88%), Query Frame = 1 Query: 118 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKG 411 REQDR+LPIAN+SRIMKKALPAN KI+KDAKET+QECVSEFISF+T EASDKCQ+EKRKTINGDDLLWAM TLGFEDY++PLK+YL R+RE+EG+ G Sbjct: 26 REQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTG 123
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB4_ORYSJ (Nuclear transcription factor Y subunit B-4 OS=Oryza sativa subsp. japonica GN=NFYB4 PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.342e-42 Identity = 81/110 (73.64%), Postives = 97/110 (88.18%), Query Frame = 1 Query: 118 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKD 447 +EQDR+LPIANI RIM++A+P NGKIAKD+KE+VQECVSEFISFITSEASDKC +EKRKTINGDDL+W+M TLGFEDY++PLK+YL YRE EGDTKG ++ + KKD Sbjct: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKG-SRASELPVKKD 129
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB7_ARATH (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana GN=NFYB7 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.768e-41 Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 1 Query: 109 SNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAK 420 +N +EQDR+LPIAN+ RIMKK LP NGKI+KDAKETVQECVSEFISF+T EASDKCQREKRKTINGDD++WA+ TLGFEDY+ PLK+YL +YR+ EG+ + K Sbjct: 32 NNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPK 135 The following BLAST results are available for this feature:
BLAST of CN185079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185079 ID=CN185079; Name=CN185079; organism=Citrus sinensis; type=EST; length=801bpback to top |