CN185079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB9_ARATH (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana GN=NFYB9 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.067e-35 Identity = 65/112 (58.04%), Postives = 93/112 (83.04%), Query Frame = 1 Query: 94 EQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGD 429 +Q P REQD+Y+PIAN+ RIM+K LP++ KI+ DAKET+QECVSE+ISF+T EA+++CQRE+RKTI +D+LWAM+ LGF++Y+DPL +++ RYRE+E D +G+A G+ Sbjct: 20 QQQPPCVAREQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPLTVFINRYREIETD-RGSALRGE 130
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB4_ARATH (Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana GN=NFYB4 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.507e-30 Identity = 64/137 (46.72%), Postives = 97/137 (70.80%), Query Frame = 1 Query: 121 EQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQLAHQGS-FPQGVNYGNSQGS 528 ++DR LPIAN+ R+MK+ LP+N KI+K+AK+TVQEC +EFISF+T EAS+KC RE RKT+NGDD+ WA++TLG ++Y D + +L +YRE E + + KG + S + + N + + +Q + F + V G+S + Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDIWWALSTLGLDNYADAVGRHLHKYREAERERTEHNKGSNDSG-NEKETNTRSDVQNQSTKFIRVVEKGSSSSA 138
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: HAP3_YEAST (Transcriptional activator HAP3 OS=Saccharomyces cerevisiae GN=HAP3 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.813e-30 Identity = 60/103 (58.25%), Postives = 81/103 (78.64%), Query Frame = 1 Query: 88 SGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME 396 SG S +REQDR+LPI N++R+MK LP + K++KDAKE +QECVSE ISF+TSEASD+C +KRKTING+D+L ++ LGFE+Y + LKIYL +YR+ + Sbjct: 26 SGSLQQISTLREQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQECVSELISFVTSEASDRCAADKRKTINGEDILISLHALGFENYAEVLKIYLAKYRQQQ 128
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: HAP3_KLULA (Transcriptional activator HAP3 OS=Kluyveromyces lactis GN=HAP3 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.513e-28 Identity = 57/96 (59.38%), Postives = 77/96 (80.21%), Query Frame = 1 Query: 109 SNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME 396 + + EQDR+LPI N++R+MK LPA K++KDAKE +QECVSEFISF+TSEA D+C KRKTING+D+L ++ LGFE+Y + LKIYL +YR+ + Sbjct: 18 NELAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTINGEDILLSLHALGFENYAEVLKIYLAKYRQQQ 113
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: HAP3_SCHPO (Transcriptional activator hap3 OS=Schizosaccharomyces pombe GN=hap3 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.629e-27 Identity = 57/87 (65.52%), Postives = 74/87 (85.06%), Query Frame = 1 Query: 136 LPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME 396 LPIAN++RIMK ALP N KI+K+AK+ VQ+CVSEFISF+T EAS++C +EKRKTI G+D+L A+ TLGFE+Y + LKI LT+YRE + Sbjct: 12 LPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDVLLALNTLGFENYAEVLKISLTKYREQQ 98
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB_XENLA (Nuclear transcription factor Y subunit beta (Fragment) OS=Xenopus laevis GN=nfyb PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.929e-20 Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 217 VQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYRE-MEGD-------TKGNAKGGDASAKKDGQPNPNTQLAHQGSFPQGVNYGNSQGSIYNYQLGDFS 558 VQECVSEFISFITSEAS++C +EKRKTING+D+L+AM+TLGF+ Y++PLK+YL ++RE M+G+ T G+ G D + + P + G + Y S I Q FS Sbjct: 1 VQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGTVTTGDGLGEDLAEEPFTSQIPAGLITTDGQQQNVMVYTTSYQQISGVQQIQFS 122
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NFYB1_ORYSJ (Nuclear transcription factor Y subunit B-1 OS=Oryza sativa subsp. japonica GN=NFYB1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.187e-15 Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 1 Query: 136 LPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME 396 LP+AN+ R++KK LP KI AK +C EF+ F+ EAS+K + E R+T+ +D L + LGF+ Y+DP+ Y+ YRE E Sbjct: 34 LPMANLVRLIKKVLPGKAKIGGAAKGLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDYLGSFGDLGFDRYVDPMDAYIHGYREFE 120
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: DPOE3_MOUSE (DNA polymerase epsilon subunit 3 OS=Mus musculus GN=Pole3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.298e-12 Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 118 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQ 471 R +D LP A I+RI+K+ALP I+K+A+ + S F+ + TS A++ + KRKT+N D+L AM + F+ +I PLK L YR D KG + + K + + Q Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFITPLKEALEAYRR---DEKGKKEASEQKKKDKDKKDSEEQ 118
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: DPOE3_RAT (DNA polymerase epsilon subunit 3 OS=Rattus norvegicus GN=Pole3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 118 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRY-REMEGDTKGNAKGGDASAKKD 447 R +D LP A I+RI+K+ALP I+K+A+ + S F+ + TS A++ + KRKT+N D+L AM + F+ ++ PLK L Y RE +G + + + KKD Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKD 114
BLAST of CN185079 vs. ExPASy Swiss-Prot
Match: NC2B_DICDI (Protein Dr1 homolog OS=Dictyostelium discoideum GN=dr1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11 Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 112 NVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASAKKDGQPNPNTQLAHQ 483 N +E + LP A +S+++K+ LP + K + + ++ + EC EFI I+SEA+D C RE+++TI + ++ A+ LGF DY + +++ +E TK +S K + P QL + Sbjct: 5 NDKEDNLSLPKATVSKLIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGREQKRTIAAEHVIKALTELGFSDYTQKVSDVYDKHK-LEVSTKSK-----SSKKFENLGKPTEQLIRE 122 The following BLAST results are available for this feature:
BLAST of CN185079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185079 ID=CN185079; Name=CN185079; organism=Citrus sinensis; type=EST; length=801bpback to top |