CN184874

Overview
NameCN184874
Unique NameCN184874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.758e-44
Identity = 88/171 (51.46%), Postives = 116/171 (67.84%), Query Frame = -1
Query:  285 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGM-KFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 794
            +NP VFFD+ +G    GR+ +ELFADVTP+TAENFR  CTGE      G+P  YKGS FHR+I +FM Q             +IYG  KF+DENF ++H  PG+LSMAN+GPNTNG QFFI T  TP+L+GKHVVFG+V+DG  +++ +E   +   + +Q VVI  CG++
Sbjct:   14 SNPIVFFDVALGGEPLGRLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIENTRTTRDKPNQDVVIIQCGEM 183          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.323e-43
Identity = 100/202 (49.50%), Postives = 120/202 (59.41%), Query Frame = -1
Query:  225 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGK--PLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDME-KVGSESGRTSQTVVIEDCGQL---------ADK*E*ERYGGNYSV*GQDD 794
            T P+ FFDI IG    GR+V EL++DV PKTAENF  LC G  G   S    PL YKGS FHR+I +FMCQ           GESIYG KF DENF +KH  P +LSMANAG NTNGSQ FI    TP LDGKHVVFG+V+ G  +++ +E     E+ + ++ V IEDCG L         A+    + YG NY     DD
Sbjct:    4 TRPKTFFDISIGGKPAGRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVRTIENNATDEADKPAKEVKIEDCGVLPSDYTVPADAEATPTDAYGDNYEENITDD 205          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.323e-43
Identity = 94/166 (56.63%), Postives = 106/166 (63.86%), Query Frame = -1
Query:  288 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQ 785
            + FFDI  G    GR++ ELF DV P T  NFR LCT +   G       YKGS FHRIIP FMCQ           G+SIYG KF DENF  KH     LSMANAGPNTNGSQFFI T    WLDGKHVVFGKVV G  V+K ME +GS SG+ S+ ++IEDCG+
Sbjct:    4 KAFFDIKAGDERLGRIIFELFNDV-PDTTRNFRELCTHKNNFG-------YKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDENFNHKHEAFS-LSMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKVVSGIDVVKKMESLGSTSGKPSKKIIIEDCGE 160          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.728e-43
Identity = 86/153 (56.21%), Postives = 103/153 (67.32%), Query Frame = -1
Query:  348 IEKMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDME 806
            ++     ++FFDI IG  + GR+V+ LF D  PKT ENF+ L TG KG G       Y+GS FHRIIPNFM Q           G SIYG KF DE+F +KH GPG+LSMANAGPNTNGSQFFICT  TPWLD +HVVFG V++G  V+K +E
Sbjct:   76 LQAKVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLE 221          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 91/177 (51.41%), Postives = 114/177 (64.41%), Query Frame = -1
Query:  279 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGK--PLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIK--DMEKVGSESGRTSQTVVIEDCGQLAD 797
            MT P+ FFDI IG   +GR+V EL+ D+ PKTAENF  LC G  G+  +    PL YKGS FHR+I +FMCQ           GESIY  KF DENF +KH  P +LSMANAGPNTNGSQ FI    TP LDGKHVVFG+V+ G  +++  + ++   E+ +  + V I+DCG L D
Sbjct:    1 MTRPKTFFDISIGGKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIENQQCDQENNKPLRDVKIDDCGVLPD 177          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.850e-43
Identity = 93/168 (55.36%), Postives = 113/168 (67.26%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKV-GSESGRTSQTVVIEDCGQL 785
            +VFFDI  G    GRVV+ L+    PKTAENFRAL TGEKG G       Y+GSTFHR+I +FM Q           G+SIYG KFADENFK++HT  G+LSMANAG +TNGSQFFI T  TPWLDG+HVVFG+V++GY ++  +E V    S R  +TV I   G+L
Sbjct:   36 KVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENVPKGRSDRPVETVKIVKSGEL 196          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.578e-43
Identity = 90/171 (52.63%), Postives = 114/171 (66.67%), Query Frame = -1
Query:  276 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTSQTVVIEDCGQLADK 785
            +++FDI  G  + GR+V+ L+    PKTAENF+ L TGE G G       YKGSTFHR+I  FM Q           G+SIYG +FADENFK++H+ PG+LSMANAG +TNGSQFFI T  TPWLDGKHVVFG+V++G  V+  +E   + S  + S  VVI DCG L D+
Sbjct:   35 KIYFDIKQGDESLGRIVLGLYGKTVPKTAENFKQLATGENGYG-------YKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADENFKLRHSTPGLLSMANAGRDTNGSQFFITTVVTPWLDGKHVVFGRVLEGMDVVTKIENTPTGSRSKPSVDVVIADCGLLPDE 198          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.120e-42
Identity = 85/148 (57.43%), Postives = 102/148 (68.92%), Query Frame = -1
Query:  348 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDME 791
            NP VFFD+ IG    GR+ +ELFADV PKTAENFR  CTGE      G P+ YKGSTFHR+I +FM Q             SIY   FADENFK++H+ PG+LSMAN+GP+TNG QFFI   K  WLDGKHVVFGK++DG  V++ +E
Sbjct:   10 NPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIE 155          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.463e-42
Identity = 92/177 (51.98%), Postives = 113/177 (63.84%), Query Frame = -1
Query:  276 KMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSG-KPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSE-SGRTSQTVVIEDCGQLADK 800
            K+  PR FFDI I     GRVV ELF+DV PKT ENFR LCTGEKG G S  KPLHYK   FHR++ +FM Q           GESIYG  F DE+F +KH    +LSMAN G +TNGSQFFI T+ TP LDG HVVFG+V+ G  V++++E   ++ + +    V I  CG+L  K
Sbjct:    4 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGELVPK 180          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.463e-42
Identity = 88/164 (53.66%), Postives = 107/164 (65.24%), Query Frame = -1
Query:  291 VFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCG 782
            VFFD+  G     ++V +L+ DV PKTA NFR L TG +G G       YKGS FHR+I +FM Q           G+SIYG KFADENFK+KHT P +LSMANAGPNTNGSQFFI     PWLDGKHVVFG+VVDG+  ++  +K  S+ G+   T+ I D G
Sbjct:    4 VFFDVQFGGDAPKKIVFKLYDDVVPKTAANFRELATGSRGFG-------YKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLELFKKNSSQQGKPKTTIKIVDSG 160          
The following BLAST results are available for this feature:
BLAST of CN184874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
PPIH_EMENI7.758e-4451.46Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPID_KLULA1.323e-4349.50Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
PPIA_SCHMA1.323e-4356.63Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]
CYPB_VICFA1.728e-4356.21Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPID_YEAST3.850e-4351.41Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
PPIB_ASPNG3.850e-4355.36Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB1_RHIOR8.578e-4352.63Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
PPIH_MOUSE1.120e-4257.43Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
PPIG_RAT1.463e-4251.98Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIA_PARPR1.463e-4253.66Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184874 ID=CN184874; Name=CN184874; organism=Citrus sinensis; type=EST; length=833bp
GAACTAAGTGGATCCCCCGCGGCTGCAGGTTTTTTTTTAACAAAAGCAAT
TTAGTCGTAGATTCATAACAAGTTCGATCCCACTTTGCTTTATAAGTGCA
TGCTGTTTTCAAAGAACCAAATAGTAGCTCTGCAACAACCTTTTTCTTCT
ATTCAGCCTAAGAAACACTAAACATCAATGACAAAATTAATAAGTTGCAG
GATTGCTGAATTTACATGTCAAACATCATCTTGACCTCACACACTATAGT
TCCCACCATATCTTTCTCATTCTCATTTATCTGCTAGCTGACCACAGTCT
TCAATCACAACTGTTTGCGAAGTCCTCCCACTCTCAGAACCCACCTTCTC
CATATCCTTGATGACACTGTAACCGTCTACCACTTTCCCAAACACAACAT
GTTTGCCATCAAGCCATGGTGTTTTCTGAGTGCATATAAAAAACTGTGAA
CCATTAGTGTTAGGTCCAGCATTAGCCATTGACAGAATTCCAGGCCCAGT
ATGCTTCATCTTGAAGTTCTCATCAGCAAACTTCATCCCATATATCGATT
CTCCTCCAGTTCCATTTCCCCGAGTGAAATCTCCCCCCTGACACATGAAG
TTAGGGATTATGCGGTGAAATGTCGAGCCCTTATAGTGTAGTGGCTTCCC
AGACGTTCCAATCCCTTTCTCACCAGTGCAGAGAGCACGGAAGTTTTCAG
CAGTTTTTGGGGTGACGTCAGCAAATAGCTCCATCACAACTCGCCCCTTG
TTCATCTTTCCAATCAGAATGTCAAAGAAAACCCTTGGATTCGTCATTTT
TTCTATCCAATCAAAAGCCTTTTGCTGTAATTC
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