CN184874

Overview
NameCN184874
Unique NameCN184874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 7.954e-73
Identity = 131/171 (76.61%), Postives = 142/171 (83.04%), Query Frame = -1
Query:  285 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 797
            M NP+VFFDILIGKM  GRVVMELFADVTP+TA NFRALCTGE GIG +GK LHYKGS FHRIIP FMCQ           GESIYG KF DENFK+KHTGPGILSMAN+GPNTNGSQFFICT+KT WLDGKHVVFGKVVDGY+V+K ME VGS+ G  S+ VVIEDCG+L
Sbjct:    1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 8.231e-70
Identity = 126/172 (73.26%), Postives = 140/172 (81.40%), Query Frame = -1
Query:  282 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLA 797
            M NPRVFFD+ +G    GR+VMELFAD TP+TAENFRALCTGEKG G SGKPLHYK S+FHR+IP FMCQ           GESIYG KFADENF  KHTGPGILSMANAGPNTNGSQFFICT KT WLDGKHVVFG+VV+G  V+K +EKVGS SGRT++ VV+EDCGQL+
Sbjct:    1 MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.128e-69
Identity = 122/172 (70.93%), Postives = 141/172 (81.98%), Query Frame = -1
Query:  282 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLA 797
            M+NP+VFFD+ I     GR+VMEL+AD TP+TAENFRALCTGEKG+G SGKPLHYKGSTFHR+IPNFMCQ            ESIYG KFADENF  +HTGPGILSMANAG  TNGSQFFICT+KT WLDGKHVVFGKV++G +V++D+EKVGS SG+TS+ V I DCGQL+
Sbjct:    1 MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.335e-69
Identity = 121/171 (70.76%), Postives = 143/171 (83.63%), Query Frame = -1
Query:  282 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLA 794
            TNP+V+FD+ +G  + GR+VMEL+AD TP+TAENFRALCTGE+GIG  GKPLHYKGS+FHR+IP FMCQ           GESIYG KF DENF  KHTGPGILSMANAG NTNGSQFFICT+KT WLDGKHVVFG+VV+G +V++D+EKVGS+SGRTS+ VVI DCGQ++
Sbjct:    3 TNPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 7.704e-68
Identity = 126/171 (73.68%), Postives = 134/171 (78.36%), Query Frame = -1
Query:  285 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 797
            M NP+VFFD+ IG    GRVVMELFAD TPKTAENFRALCTGEKG+G  GKPLHYKGSTFHR+IP FMCQ           GESIYG KF DENF  KHTGPGILSMANAGP TNGSQFFICT KT WL+GKHVVFG+VV+G  VIK  E VGS SGR S+ VVI DCGQL
Sbjct:    1 MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 7.704e-68
Identity = 121/171 (70.76%), Postives = 138/171 (80.70%), Query Frame = -1
Query:  285 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 797
            M NP+V+FD+ +G    GR+VMEL+AD  P+TAENFRALCTGE+GIG SGKPLHYKGS FHR+IP FMCQ           GESIYGMKF DENF  KHTGPGILSM NAG NTNGSQFFICT+KT WLDGKHVVFG+VV+G  V++D+EKVGS+SGRTS+ VV  DCGQL
Sbjct:    1 MVNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.230e-65
Identity = 116/171 (67.84%), Postives = 139/171 (81.29%), Query Frame = -1
Query:  282 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLA 794
            ++P+VFFD+ IG    G++VMEL+ D TPKTAENFRALCTGEKG+G SGKPLH+KGS+FHR+IPNFMCQ           GESIYG KF DENF+ KHTGPGILSMANAG NTNGSQFFICT KT WLDGKHVVFG+VV+G  V+K +EK+GS SG+ ++ VVI DCG+++
Sbjct:    3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.973e-65
Identity = 119/172 (69.19%), Postives = 134/172 (77.91%), Query Frame = -1
Query:  282 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLA 797
            M+NPRVFFD+ +     GR+ MELFAD TP TAENFRALCTGEKG+G  GKPLH+KGS FHR+IP FMCQ           GESIYG KF DENF  KHTG GILSMAN+GPNTNGSQFFICT KT WLDGKHVVFG+VV G  V+K +EKVGS+SG+TS+ V I DCGQL+
Sbjct:    1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.776e-64
Identity = 116/172 (67.44%), Postives = 136/172 (79.07%), Query Frame = -1
Query:  282 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLA 797
            M  P+V+FD+ I     GR+VMEL+ D TP+TAENFRALCTGEKG+G +GKPLH+KGS FHR+IPNFMCQ           GESIYG KF DENF+ KHTGPGILSMANAG NTNGSQFFICT KT WLDGKHVVFG+VV+G  V+K +EKVGS SG+ ++ VV+ DCGQL+
Sbjct:    1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.320e-64
Identity = 116/172 (67.44%), Postives = 133/172 (77.33%), Query Frame = -1
Query:  282 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLA 797
            M NPRVFFD+ +G    GR+VMEL+A+  PKTAENFRALCTGEKG+G SGKPLHYKGSTFHR+IP FMCQ           GESIYG KF DE F  K   PG+LSMANAGPNTNGSQFFICT  TPWLDGKHVVFG+VV+G  V+K +EKVG+ +G TS+ V + DCGQL+
Sbjct:    1 MANPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172          
The following BLAST results are available for this feature:
BLAST of CN184874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
CP19C_ARATH7.954e-7376.61Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
CYPH_CATRO8.231e-7073.26Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_LUPLU3.128e-6970.93Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP19A_ARATH5.335e-6970.76Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CYPH_SOLLC7.704e-6873.68Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_BRANA7.704e-6870.76Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP19B_ARATH1.230e-6567.84Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CP18D_ARATH7.973e-6569.19Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CP18C_ARATH1.776e-6467.44Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CYPH_MAIZE2.320e-6467.44Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184874 ID=CN184874; Name=CN184874; organism=Citrus sinensis; type=EST; length=833bp
GAACTAAGTGGATCCCCCGCGGCTGCAGGTTTTTTTTTAACAAAAGCAAT
TTAGTCGTAGATTCATAACAAGTTCGATCCCACTTTGCTTTATAAGTGCA
TGCTGTTTTCAAAGAACCAAATAGTAGCTCTGCAACAACCTTTTTCTTCT
ATTCAGCCTAAGAAACACTAAACATCAATGACAAAATTAATAAGTTGCAG
GATTGCTGAATTTACATGTCAAACATCATCTTGACCTCACACACTATAGT
TCCCACCATATCTTTCTCATTCTCATTTATCTGCTAGCTGACCACAGTCT
TCAATCACAACTGTTTGCGAAGTCCTCCCACTCTCAGAACCCACCTTCTC
CATATCCTTGATGACACTGTAACCGTCTACCACTTTCCCAAACACAACAT
GTTTGCCATCAAGCCATGGTGTTTTCTGAGTGCATATAAAAAACTGTGAA
CCATTAGTGTTAGGTCCAGCATTAGCCATTGACAGAATTCCAGGCCCAGT
ATGCTTCATCTTGAAGTTCTCATCAGCAAACTTCATCCCATATATCGATT
CTCCTCCAGTTCCATTTCCCCGAGTGAAATCTCCCCCCTGACACATGAAG
TTAGGGATTATGCGGTGAAATGTCGAGCCCTTATAGTGTAGTGGCTTCCC
AGACGTTCCAATCCCTTTCTCACCAGTGCAGAGAGCACGGAAGTTTTCAG
CAGTTTTTGGGGTGACGTCAGCAAATAGCTCCATCACAACTCGCCCCTTG
TTCATCTTTCCAATCAGAATGTCAAAGAAAACCCTTGGATTCGTCATTTT
TTCTATCCAATCAAAAGCCTTTTGCTGTAATTC
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