CN184874

Overview
NameCN184874
Unique NameCN184874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.911e-42
Identity = 92/177 (51.98%), Postives = 113/177 (63.84%), Query Frame = -1
Query:  276 KMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSG-KPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSE-SGRTSQTVVIEDCGQLADK 800
            K+  PR FFDI I     GRVV ELF+DV PKT ENFR LCTGEKG G S  KPLHYK   FHR++ +FM Q           GESIYG  F DE+F +KH    +LSMAN G +TNGSQFFI T+ TP LDG HVVFG+V+ G  V++++E   ++ + +    V I  CG+L  K
Sbjct:    4 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGELIPK 180          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.911e-42
Identity = 92/177 (51.98%), Postives = 113/177 (63.84%), Query Frame = -1
Query:  276 KMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSG-KPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSE-SGRTSQTVVIEDCGQLADK 800
            K+  PR FFDI I     GRVV ELF+DV PKT ENFR LCTGEKG G S  KPLHYK   FHR++ +FM Q           GESIYG  F DE+F +KH    +LSMAN G +TNGSQFFI T+ TP LDG HVVFG+V+ G  V++++E   ++ + +    V I  CG+L  K
Sbjct:    4 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGELIPK 180          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.496e-42
Identity = 89/168 (52.98%), Postives = 113/168 (67.26%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTSQTVVIEDCGQL 785
            +VFFD+ +G+ + GRVV+ LF    PKT ENF AL TGEKG G       +KGS FHR+I +FM Q           G+SIYG +F DENFK+KH GPG +SMANAG +TNGSQFFI T KT WLDGKHVVFGKV++G  V++ +E   ++S  +  + V I DCG +
Sbjct:   36 KVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTIADCGTI 196          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.496e-42
Identity = 88/170 (51.76%), Postives = 113/170 (66.47%), Query Frame = -1
Query:  279 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSE-SGRTSQTVVIEDCGQLAD 785
            +++FDI  G+ + GR+V  L+    PKTAENF+ L TG+ G G       YKGSTFHR+I  FM Q           G+SIYG +F DENFK++HT PG+LSMANAGP++NGSQFFI T  T WLDGKHVVFGKV++G  V+  +EK  +    + +  VVI DCG L+D
Sbjct:   35 KIYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNGYG-------YKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVIADCGLLSD 197          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.257e-42
Identity = 89/170 (52.35%), Postives = 112/170 (65.88%), Query Frame = -1
Query:  276 VFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTSQTVVIEDCGQLADK 782
            V+FD+  G    GRV + LF    PKTAENFRAL TGEKG G       Y+GS FHR+IPNFM Q           G+SIYG +F DENFK+ H  PG+LSMANAGP++NGSQFFI T KTPWLDG HVVFG+V+ GY ++K + K  +++  +  + V I   GQL+ +
Sbjct:   29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFG-------YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQLSQE 191          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.257e-42
Identity = 92/174 (52.87%), Postives = 111/174 (63.79%), Query Frame = -1
Query:  285 KMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQ--TVVIEDCGQL 800
            K  +  V+FD+   + + GR+VM+L  D+ PKTA+NFR LC   KG G       YKGSTFHRIIP FM Q           G SIYG KF DENF++KHT  GILSMAN G +TNGSQFFI   KT WLD KHVVFG+VV+G  V+  + K GSESG+  +   + I DCG L
Sbjct:    3 KEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-------YKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRDCGVL 169          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.484e-42
Identity = 86/173 (49.71%), Postives = 111/173 (64.16%), Query Frame = -1
Query:  285 KMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGM-KFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 800
            K  NP VFFDI +G  + GR+ MELF  +TP+TAENFR  CTGE      G+P  YK S FHR+I +FM Q             +IYG  +F DENF +KH  PG+LSMAN+GPNTNG QFFI T  TP+L+ KHVVFG+VV+G  V++ +E   +   + +Q V I  CG++
Sbjct:   10 KTPNPVVFFDITLGGESLGRIKMELFTSITPRTAENFRQFCTGESK-SPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVEGMDVVRMIENTRTTRDKPNQDVTIIQCGEM 181          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.239e-41
Identity = 87/168 (51.79%), Postives = 112/168 (66.67%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTSQTVVIEDCGQL 785
            +V+FD+ IG  + GRV+  LF    PKT +NF AL TGEKG G       YK S FHR+I +FM Q           G+SIYG +F DENFK+KH GPG +SMANAG +TNGSQFFI T KT WLDGKHVVFGKV++G  V++ +E   ++S  +  + V+I DCG++
Sbjct:   45 KVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKI 205          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.239e-41
Identity = 89/159 (55.97%), Postives = 106/159 (66.67%), Query Frame = -1
Query:  306 VFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVV 782
            V+FDI  G    GRVV+ L+    PKTAENFRAL TGEKG G       Y+GSTFHR+I  FM Q           G+SIYG KF DENFK++HT  G+LSMANAG +TNGSQFFI T  TPWLDG+HVVFG+V++GY V++ +E V    G   Q VV
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVV 173          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.239e-41
Identity = 97/185 (52.43%), Postives = 114/185 (61.62%), Query Frame = -1
Query:  285 RVFFDI-----LIGKMNK---------GRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYS--VIKDMEKVGSESG--RTSQTVVIEDCGQL 785
            +VFFD+     ++G  NK         GR+   L+ DV PKTA NF+ LCTG+ G G       YKGS+FHRIIP FM Q           G+SIYG KFADENF  KH  PG+LSMANAGPNTNGSQFF+ T  T WLDG+HVVFG+V D  S  V+K +E  GS SG  R S+   I DCG L
Sbjct:   46 KVFFDLEWEGPVLGPNNKPTSEIKAQSGRINFTLYDDVVPKTARNFKELCTGQNGFG-------YKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVKALEATGSSSGAIRYSKKPTIVDCGAL 223          
The following BLAST results are available for this feature:
BLAST of CN184874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
PPIG_MOUSE1.911e-4251.98Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN1.911e-4251.98Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
PPIB_CHICK2.496e-4252.98Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIB2_RHIOR2.496e-4251.76Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
PPIB_SCHPO4.257e-4252.35Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
CYPH_ENCCU4.257e-4252.87Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
PPIH_ASPOR9.484e-4249.71Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIB_HUMAN1.239e-4151.79Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
PPIB_ASPOR1.239e-4155.97Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CYPH_NEUCR1.239e-4152.43Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184874 ID=CN184874; Name=CN184874; organism=Citrus sinensis; type=EST; length=833bp
GAACTAAGTGGATCCCCCGCGGCTGCAGGTTTTTTTTTAACAAAAGCAAT
TTAGTCGTAGATTCATAACAAGTTCGATCCCACTTTGCTTTATAAGTGCA
TGCTGTTTTCAAAGAACCAAATAGTAGCTCTGCAACAACCTTTTTCTTCT
ATTCAGCCTAAGAAACACTAAACATCAATGACAAAATTAATAAGTTGCAG
GATTGCTGAATTTACATGTCAAACATCATCTTGACCTCACACACTATAGT
TCCCACCATATCTTTCTCATTCTCATTTATCTGCTAGCTGACCACAGTCT
TCAATCACAACTGTTTGCGAAGTCCTCCCACTCTCAGAACCCACCTTCTC
CATATCCTTGATGACACTGTAACCGTCTACCACTTTCCCAAACACAACAT
GTTTGCCATCAAGCCATGGTGTTTTCTGAGTGCATATAAAAAACTGTGAA
CCATTAGTGTTAGGTCCAGCATTAGCCATTGACAGAATTCCAGGCCCAGT
ATGCTTCATCTTGAAGTTCTCATCAGCAAACTTCATCCCATATATCGATT
CTCCTCCAGTTCCATTTCCCCGAGTGAAATCTCCCCCCTGACACATGAAG
TTAGGGATTATGCGGTGAAATGTCGAGCCCTTATAGTGTAGTGGCTTCCC
AGACGTTCCAATCCCTTTCTCACCAGTGCAGAGAGCACGGAAGTTTTCAG
CAGTTTTTGGGGTGACGTCAGCAAATAGCTCCATCACAACTCGCCCCTTG
TTCATCTTTCCAATCAGAATGTCAAAGAAAACCCTTGGATTCGTCATTTT
TTCTATCCAATCAAAAGCCTTTTGCTGTAATTC
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