CN184874

Overview
NameCN184874
Unique NameCN184874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.789e-40
Identity = 87/168 (51.79%), Postives = 111/168 (66.07%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTSQTVVIEDCGQL 785
            +V+FD+ IG  + GRVV  LF    PKT +NF AL TGEKG G       YK S FHR+I +FM Q           G+SIYG +F DENFK+KH GPG +SMANAG +TNGSQFFI T KT WLDGKHVVFGKV++G  V++ +E   ++S  +  + V+I D G++
Sbjct:   45 KVYFDLQIGDESVGRVVFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVESTKTDSRDKPLKDVIIVDSGKI 205          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.336e-40
Identity = 87/168 (51.79%), Postives = 110/168 (65.48%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQT-VVIEDCGQL 785
            +V+FDI  G+ + G++VM L+ DV PKT ENFRALCTGE G G       YKGS FHR+I NFM Q           GESIYG KF DENF++KHT P  LSMANAG +TNGSQFFI T  T WLDGKHVVFG+V++G  ++  +E   + +    +  + I D G++
Sbjct:   33 KVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGEI 193          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.336e-40
Identity = 86/170 (50.59%), Postives = 108/170 (63.53%), Query Frame = -1
Query:  285 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGS-ESGRTSQTVVIEDCGQL 791
            NP VF ++  G    G +V+ELFADVTP+TAENFR  CTGE      G P  YK  TFHR+I +FM Q             SIYG KF DENF++KH GPG+LSMANAG +TNG QFFI   KT +LD KHVVFG+V+DG   ++ +E V +  + +    +V+  CGQL
Sbjct:   16 NPIVFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGE--YKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENVPTGANNKPKLPIVVVQCGQL 183          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.051e-40
Identity = 91/189 (48.15%), Postives = 117/189 (61.90%), Query Frame = -1
Query:  255 KMTNPRVFFDILIG-----KMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGS-ESGRTSQTVVIEDCGQL-ADK*E*ERYG 800
            K  NP V+ D+  G     +    R+V+EL+AD  P+TAENFR LCT    + ++G+PL ++ S FHR+IP FM Q           GESIYG KF DE+   KH  P +LSMANAG NTNGSQFFI T  TP LDGKHVVFG+V+ G  V++ +E V +  S R  + V I DCG+L  D+   + YG
Sbjct:    9 KPGNPIVYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVESVETVASDRPKEDVKIVDCGELTGDEVSNQTYG 197          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.984e-40
Identity = 88/172 (51.16%), Postives = 107/172 (62.21%), Query Frame = -1
Query:  282 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLA 797
            M+N   +FDI I     GR+  ELF DV PKTA NF+ LC G+K    +G  L Y GS+FHR I  FM Q           GESIYG KF DENF++KH  P +LSMANAGP TNGSQFFI T  TP LDGKHVVFG+V+   S+++ +E + + S R  Q V I   G L+
Sbjct:    1 MSNTIAYFDITIANEPAGRLTFELFDDVVPKTANNFKHLCIGDK-TNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIENIPTTSDRPDQAVTISSAGVLS 171          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.984e-40
Identity = 90/169 (53.25%), Postives = 111/169 (65.68%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDME--KVGSESGRTSQTVVIEDCGQL 785
            +V+FDI  G    GRVVM L+    P+T ENFRAL TGEKG G       Y+GS FHR+I NFM Q           G+SIYG +F DENFK+KHT  G+LSMANAG +TNGSQFFI T  T WLDGKHVVFG+V++GY +I+ +E  K G+ + R  + V I   G+L
Sbjct:   36 KVYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGYEIIEKIENSKTGA-ADRPVEAVKIAKSGEL 196          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 1.159e-39
Identity = 84/146 (57.53%), Postives = 101/146 (69.18%), Query Frame = -1
Query:  348 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDME 785
            +V+FDI  G    GR+VM L+    PKTAENFRAL TGEKG G       Y+GSTFHR+I  FM Q           G+SIYG KF DENFK+KH+  G+LSMANAG +TNGSQFFI T  T WLDGKHVVFG+V++GY V++ +E
Sbjct:   36 KVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIE 174          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.373e-39
Identity = 84/146 (57.53%), Postives = 99/146 (67.81%), Query Frame = -1
Query:  348 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDME 785
            +VFFD+ IG  + GR+V+ LF +V PKT ENF AL TGEKG G       YKGS FHR+I +FM Q           G SIYG  F DENFK+KH G G +SMANAGP+TNGSQFFI   K  WLDGKHVVFGKV+DG +V+  +E
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIE 177          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.373e-39
Identity = 84/146 (57.53%), Postives = 98/146 (67.12%), Query Frame = -1
Query:  348 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDME 785
            +VFFD+ IG  + GR+V+ LF  V PKT ENF AL TGEKG G       YKGS FHR+I +FM Q           G SIYG  F DENFK+KH G G +SMANAGP+TNGSQFFI   K  WLDGKHVVFGKV+DG +V+  +E
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIE 177          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.514e-39
Identity = 84/146 (57.53%), Postives = 98/146 (67.12%), Query Frame = -1
Query:  348 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDME 785
            +VFFD+ IG  + GR+V+ LF  V PKT ENF AL TGEKG G       YKGS FHR+I +FM Q           G SIYG  F DENFK+KH G G +SMANAGP+TNGSQFFI   K  WLDGKHVVFGKV+DG +V+  +E
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIE 177          
The following BLAST results are available for this feature:
BLAST of CN184874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
PPIB_MOUSE1.789e-4051.79Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPIB_YARLI2.336e-4051.79Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
CYP11_CAEEL2.336e-4050.59Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
PPID_USTMA3.051e-4048.15Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPID_CRYNE3.984e-4051.16Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPIB_GIBZE3.984e-4053.25Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPIB_NEUCR1.159e-3957.53Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPIC_MOUSE3.373e-3957.53Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
PPIC_HUMAN3.373e-3957.53Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIC_BOVIN7.514e-3957.53Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184874 ID=CN184874; Name=CN184874; organism=Citrus sinensis; type=EST; length=833bp
GAACTAAGTGGATCCCCCGCGGCTGCAGGTTTTTTTTTAACAAAAGCAAT
TTAGTCGTAGATTCATAACAAGTTCGATCCCACTTTGCTTTATAAGTGCA
TGCTGTTTTCAAAGAACCAAATAGTAGCTCTGCAACAACCTTTTTCTTCT
ATTCAGCCTAAGAAACACTAAACATCAATGACAAAATTAATAAGTTGCAG
GATTGCTGAATTTACATGTCAAACATCATCTTGACCTCACACACTATAGT
TCCCACCATATCTTTCTCATTCTCATTTATCTGCTAGCTGACCACAGTCT
TCAATCACAACTGTTTGCGAAGTCCTCCCACTCTCAGAACCCACCTTCTC
CATATCCTTGATGACACTGTAACCGTCTACCACTTTCCCAAACACAACAT
GTTTGCCATCAAGCCATGGTGTTTTCTGAGTGCATATAAAAAACTGTGAA
CCATTAGTGTTAGGTCCAGCATTAGCCATTGACAGAATTCCAGGCCCAGT
ATGCTTCATCTTGAAGTTCTCATCAGCAAACTTCATCCCATATATCGATT
CTCCTCCAGTTCCATTTCCCCGAGTGAAATCTCCCCCCTGACACATGAAG
TTAGGGATTATGCGGTGAAATGTCGAGCCCTTATAGTGTAGTGGCTTCCC
AGACGTTCCAATCCCTTTCTCACCAGTGCAGAGAGCACGGAAGTTTTCAG
CAGTTTTTGGGGTGACGTCAGCAAATAGCTCCATCACAACTCGCCCCTTG
TTCATCTTTCCAATCAGAATGTCAAAGAAAACCCTTGGATTCGTCATTTT
TTCTATCCAATCAAAAGCCTTTTGCTGTAATTC
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