CN184874

Overview
NameCN184874
Unique NameCN184874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.186e-38
Identity = 86/174 (49.43%), Postives = 110/174 (63.22%), Query Frame = -1
Query:  285 KMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGM-KFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGS-ESGRTSQTVVIEDCGQL 800
            ++  P VFFDI IG +  GR+ MELF+D+ P+TAENFR LCTGE     +G P  YK   FHR+I +FM Q              IYG  +FADENF  KHTG G+LSMAN+GPN+NG QFFI      +LDGKHVVFG++VDG   ++ +E V +  + R    V I +CGQ+
Sbjct:    7 QVERPVVFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATGPNNRPKLPVKITECGQM 178          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.855e-38
Identity = 84/173 (48.55%), Postives = 110/173 (63.58%), Query Frame = -1
Query:  285 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMK-FADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEK--VGSESGRTSQTVVIEDCGQL 794
            T P VF DI I     GR+ + LF+ + PKTAENFR  CTGE  +G + KP+ YK STFHRII  FM Q             +I+  + F DENF +KH  PG+LSMANAG ++NG QFFI T    +LDGKHVVFG+V++GY ++K++E   VG+ S R    V I +CG++
Sbjct:    3 TEPVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGET-LGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANS-RPKSNVAIVECGEM 173          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.729e-38
Identity = 84/163 (51.53%), Postives = 105/163 (64.42%), Query Frame = -1
Query:  291 FFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCG 779
            +F I I    +  +  ELF +V PKT +NF +LC G +     G+ L YKGS FHR+I NFM Q           GESIYG KF DENF++KH  P +LSMANAGPNTNGSQFFI T  TP LDGKHVVFGKV+ G S ++ +E + +++      VVIE+CG
Sbjct:    6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFE---KDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.871e-38
Identity = 82/168 (48.81%), Postives = 108/168 (64.29%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTSQTVVIEDCGQL 785
            +VFFDI +      R+++ LF    PKT ENF+ L  G +     G+   YKGSTFHR+I +FM Q           G SIYG +F DENFK++H G G LSMANAGP+TNGSQFFI T KT WLDGKHVVFGKVV+G ++++ +E   ++S  R  +++ I  CG +
Sbjct:   33 KVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCGHI 198          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.417e-37
Identity = 86/169 (50.89%), Postives = 105/169 (62.13%), Query Frame = -1
Query:  282 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESG-RTSQTVVIEDCGQLA 785
            +V+FD+ IG    GR+V+ LF    PKTA NF  L    KG G       Y GS FHR+I +FM Q           G SIYG KFADENFK+KH G G LSMANAG +TNGSQFFI T KTPWLDG+HVVFGK+++G  V++ +E+     G R  Q V+I   G +A
Sbjct:   30 KVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEG-------YPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVIIAASGHIA 191          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.417e-37
Identity = 83/168 (49.40%), Postives = 107/168 (63.69%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESG-RTSQTVVIEDCGQL 785
            +VFFD+ IG    G++V+ LF +V PKT +NF  L    +G G       Y GS FHR+I NFM Q           G SIYG +F DENFK++H GPG LSMANAG +TNGSQFFI T KT WLDGKHVVFGK+++G  V++++E     +G R  + VVI + G +
Sbjct:   27 KVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEG-------YVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVIANAGHI 187          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.123e-37
Identity = 81/155 (52.26%), Postives = 98/155 (63.23%), Query Frame = -1
Query:  285 GRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGS-ESGRTSQTVVIEDCGQL 746
            GR+  ELF+D+ P+T+ENFR LCTGE     +  P  YK S FHRII +FMCQ             SIYG KF DENF +KH   G+LSMAN+GP TNG QFFI  Q  P+LDGKHVVFGKVVDG   ++ ME V +  + R    V I  CG++
Sbjct:    4 GRLKCELFSDIVPRTSENFRQLCTGE--FRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENVPTGANNRPKMAVRITQCGEM 156          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 7.776e-36
Identity = 81/172 (47.09%), Postives = 106/172 (61.63%), Query Frame = -1
Query:  276 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKP-LHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVG-SESGRTSQTVVIEDCGQLADK 785
            RVF DI + +   GR+ + LF +  PKT ENFRALCTGE G+  + K  LHYK + FHRI+  FM Q           G SIYG  F DE FK+KH+ P +LSMAN GPN+N SQFFI T   P  +GKHVVFG+VV G +V+  ++ +   +  +    V+I +CG+L  K
Sbjct:    6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISNCGELVKK 177          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.040e-35
Identity = 84/168 (50.00%), Postives = 103/168 (61.31%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVV-DGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 785
            + F DI I   + GR+V+EL  DV PKT +NF         IG   K   YKGSTFHR+I +FM Q           G SIYG +F DENF +KH   G++SMANAGPNTNGSQFFI T KT WLDG+HVVFGK+  D +  ++ +E +GS  GR S+   I D G L
Sbjct:   24 KAFMDIEIDGESAGRIVLELRGDVVPKTVKNF---------IGLFDK---YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRPSKIAKITDIGLL 178          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.598e-35
Identity = 82/175 (46.86%), Postives = 103/175 (58.86%), Query Frame = -1
Query:  276 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVV---IEDCGQLADK 791
            N R FFDI I     GR+V  L+    P+T ENFRA CTGE G   +G    Y+GS FHR+I  FM Q           G SIYG  F DEN  +KH  P +LSMAN GP+TNGSQFFI +++ P LDGKH VFG+V+ G  V+K +E +  E+G   + V    I  CG++  K
Sbjct:    8 NKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELG-KMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENL--ETGNEDKPVCKVEITHCGEMVRK 179          
The following BLAST results are available for this feature:
BLAST of CN184874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
PPIH_RHIOR2.186e-3849.43Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIH_SCHPO2.855e-3848.55Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
PPID_SCHPO3.729e-3851.5340 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPIB_SCHMA4.871e-3848.81Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CYP5_CAEEL1.417e-3750.89Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
CYP6_CAEEL2.417e-3749.40Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]
PPIH_USTMA4.123e-3752.26Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
CYP9_CAEEL7.776e-3647.09Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIA_NEOCA5.040e-3550.00Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
CYP8_CAEEL8.598e-3546.86Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184874 ID=CN184874; Name=CN184874; organism=Citrus sinensis; type=EST; length=833bp
GAACTAAGTGGATCCCCCGCGGCTGCAGGTTTTTTTTTAACAAAAGCAAT
TTAGTCGTAGATTCATAACAAGTTCGATCCCACTTTGCTTTATAAGTGCA
TGCTGTTTTCAAAGAACCAAATAGTAGCTCTGCAACAACCTTTTTCTTCT
ATTCAGCCTAAGAAACACTAAACATCAATGACAAAATTAATAAGTTGCAG
GATTGCTGAATTTACATGTCAAACATCATCTTGACCTCACACACTATAGT
TCCCACCATATCTTTCTCATTCTCATTTATCTGCTAGCTGACCACAGTCT
TCAATCACAACTGTTTGCGAAGTCCTCCCACTCTCAGAACCCACCTTCTC
CATATCCTTGATGACACTGTAACCGTCTACCACTTTCCCAAACACAACAT
GTTTGCCATCAAGCCATGGTGTTTTCTGAGTGCATATAAAAAACTGTGAA
CCATTAGTGTTAGGTCCAGCATTAGCCATTGACAGAATTCCAGGCCCAGT
ATGCTTCATCTTGAAGTTCTCATCAGCAAACTTCATCCCATATATCGATT
CTCCTCCAGTTCCATTTCCCCGAGTGAAATCTCCCCCCTGACACATGAAG
TTAGGGATTATGCGGTGAAATGTCGAGCCCTTATAGTGTAGTGGCTTCCC
AGACGTTCCAATCCCTTTCTCACCAGTGCAGAGAGCACGGAAGTTTTCAG
CAGTTTTTGGGGTGACGTCAGCAAATAGCTCCATCACAACTCGCCCCTTG
TTCATCTTTCCAATCAGAATGTCAAAGAAAACCCTTGGATTCGTCATTTT
TTCTATCCAATCAAAAGCCTTTTGCTGTAATTC
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