CN184874

Overview
NameCN184874
Unique NameCN184874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13044 contig Csv1_Contig13044:11..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.176e-54
Identity = 108/199 (54.27%), Postives = 132/199 (66.33%), Query Frame = -1
Query:  225 KMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL-------ADK*E*ERYGGNYSV*GQDD 800
            K    RVFFDI IG    GR+V EL+ D+ PKTAENFRALCTGEKG+G  GKPLHYKGSTFHR+I  FM Q           GESIYG KF DENF++KH  P +LSMANAGP TNGSQFF+ T  TP LDGKHVVFG+V+ G SV++ +E + ++  + ++  VI DCG+L       AD    + YG  Y    +D+
Sbjct:    8 KQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPTKDAVIADCGELSGDAAVSADTKTADAYGDEYEDFPEDE 206          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.332e-54
Identity = 106/167 (63.47%), Postives = 122/167 (73.05%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 785
            RV+ DI IG    GR+ +EL  DV PKTAENFRALCTGE G G       YK S+FHRIIP FMCQ           G+SIYG KF DENF +KHTGPG LSMANAG NTNGSQFFICT+KT WLDGKHVVFG+VV G +V+++ME+ GS SG+ S+ VVI DCG+L
Sbjct:  156 RVYLDIQIGNTLAGRIEIELRGDVVPKTAENFRALCTGEAGFG-------YKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASGKPSKRVVIVDCGEL 315          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.270e-54
Identity = 107/180 (59.44%), Postives = 130/180 (72.22%), Query Frame = -1
Query:  285 QKAFDWIEKMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 824
            +K+ + ++++T+ +V+FD+ I     GR+VM LF    PKT ENFRALCTGEKGIG +GK LHYKGS+FHRIIP+FM Q           GESIYG KFADENFK+KHTGPG LSMANAG +TNGSQFFI T  T WLDG+HVVFGKVV G  V+  +E  G++SG     VVI D G+L
Sbjct:   24 KKSKENLKEITH-KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.842e-53
Identity = 104/169 (61.54%), Postives = 127/169 (75.15%), Query Frame = -1
Query:  285 PRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESG-RTSQTVVIEDCGQL 788
            PRV+FDI IG  + GR+ MEL+AD+ PKTA+NFR+LCTGEKGIG SGKPLHYKGS FHR+I  FM Q           GESIYG KF DE F +KH  P +LSMANAGPNTNGSQFFI T  TP LDGKHVVFG+V++G SV++ +E + ++SG R ++  +I DCG+L
Sbjct:   11 PRVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGEL 179          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.104e-53
Identity = 100/168 (59.52%), Postives = 123/168 (73.21%), Query Frame = -1
Query:  285 PRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 788
            PRVFFDI IG+   GR+  ELF DV PKTAENFRALCTGEKG+G  GKPLH+KGS FHR+I  FM Q           GESIYG KF DENF++KH  P +LSMAN+GP TNGSQFFI T  TP LDGKHVVFG+V++G SV++ +E + +++ + +  V I +CG+L
Sbjct:    7 PRVFFDIQIGQQQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQADKPTTDVTIAECGEL 174          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.037e-52
Identity = 101/171 (59.06%), Postives = 122/171 (71.35%), Query Frame = -1
Query:  285 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 797
            M+NP+VFFD+       GR+VMEL ADV P+TAENFRALCTGEKG G       YKG +FHR+IP FM Q           G+SIYG KF DENF +KHTGPG LSMANAGPNTNGSQFFI T K  WLDGKHVVFG+V +G  V++++E +GS +G     ++I++CGQL
Sbjct:    1 MSNPKVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFG-------YKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESLGSPNGTPRAKIIIDNCGQL 164          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.660e-52
Identity = 102/159 (64.15%), Postives = 117/159 (73.58%), Query Frame = -1
Query:  315 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQ 791
            NP V+ D+       GRVV+EL ADV PKTAENFRALCTGEKG G       YKGSTFHR+IP+FMCQ           G+SIYG +F DENFK+KH GPG+LSMANAGPNTNGSQFFICT KT WLDGKHVVFG V +G  V+K +E  GS+SG+TS+
Sbjct:   46 NPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFKLKHEGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSK 197          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 205.297 bits (521), Expect = 3.474e-52
Identity = 104/172 (60.47%), Postives = 121/172 (70.35%), Query Frame = -1
Query:  279 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG-TSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLAD 791
            NPRVFFD+ IG    GR+V+ELFAD+ PKTAENFRALCTGEKG G T+GKPLH+KG  FHRII  FM Q           GESIYG KF DENF  KH   G+LSMANAGPNTNGSQFFI T  TP LDGKHVVFG+V+ G  V + +E V     + ++  VI +CG+L +
Sbjct:   15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEVNGEKPAKLCVIAECGELKE 186          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 205.297 bits (521), Expect = 3.474e-52
Identity = 105/173 (60.69%), Postives = 123/173 (71.10%), Query Frame = -1
Query:  279 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG-TSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLAD 794
            +NPRVFFD+ IG    GR+V+ELFAD+ PKTAENFRALCTGEKGIG T+GKPLH+KG  FHRII  FM Q           GESIYG KF DENF  KH   G+LSMANAG NTNGSQFFI T  TP LDGKHVVFG+V+ G  V K +E V  +  + ++  VI +CG+L +
Sbjct:   14 SNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGELKE 186          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 5.926e-52
Identity = 104/172 (60.47%), Postives = 121/172 (70.35%), Query Frame = -1
Query:  279 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG-TSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQLAD 791
            NPRVFFD+ IG    GR+V+ELFAD+ PKTAENFRALCTGEKG G T+GKPLH+KG  FHRII  FM Q           GESIYG KF DENF  KH   G+LSMANAGPNTNGSQFFI T  TP LDGKHVVFG+V+ G  V + +E V     + ++  VI +CG+L +
Sbjct:   15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEVNGEKPAKLCVIAECGELKE 186          
The following BLAST results are available for this feature:
BLAST of CN184874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
PPID_NEUCR2.176e-5454.2741 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIE_RHIOR6.332e-5463.47Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
CP20A_ARATH8.270e-5459.44Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
PPID_GIBZE1.842e-5361.54Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPID_EMENI4.104e-5359.52Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PPIA1_RHIOR2.037e-5259.06Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIF_BOVIN2.660e-5264.15Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPID_MOUSE3.474e-5260.4740 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPID_BOVIN3.474e-5260.6940 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPID_RAT5.926e-5260.4740 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184874 ID=CN184874; Name=CN184874; organism=Citrus sinensis; type=EST; length=833bp
GAACTAAGTGGATCCCCCGCGGCTGCAGGTTTTTTTTTAACAAAAGCAAT
TTAGTCGTAGATTCATAACAAGTTCGATCCCACTTTGCTTTATAAGTGCA
TGCTGTTTTCAAAGAACCAAATAGTAGCTCTGCAACAACCTTTTTCTTCT
ATTCAGCCTAAGAAACACTAAACATCAATGACAAAATTAATAAGTTGCAG
GATTGCTGAATTTACATGTCAAACATCATCTTGACCTCACACACTATAGT
TCCCACCATATCTTTCTCATTCTCATTTATCTGCTAGCTGACCACAGTCT
TCAATCACAACTGTTTGCGAAGTCCTCCCACTCTCAGAACCCACCTTCTC
CATATCCTTGATGACACTGTAACCGTCTACCACTTTCCCAAACACAACAT
GTTTGCCATCAAGCCATGGTGTTTTCTGAGTGCATATAAAAAACTGTGAA
CCATTAGTGTTAGGTCCAGCATTAGCCATTGACAGAATTCCAGGCCCAGT
ATGCTTCATCTTGAAGTTCTCATCAGCAAACTTCATCCCATATATCGATT
CTCCTCCAGTTCCATTTCCCCGAGTGAAATCTCCCCCCTGACACATGAAG
TTAGGGATTATGCGGTGAAATGTCGAGCCCTTATAGTGTAGTGGCTTCCC
AGACGTTCCAATCCCTTTCTCACCAGTGCAGAGAGCACGGAAGTTTTCAG
CAGTTTTTGGGGTGACGTCAGCAAATAGCTCCATCACAACTCGCCCCTTG
TTCATCTTTCCAATCAGAATGTCAAAGAAAACCCTTGGATTCGTCATTTT
TTCTATCCAATCAAAAGCCTTTTGCTGTAATTC
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