CN184874

Overview
NameCN184874
Unique NameCN184874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13044 contig Csv1_Contig13044:11..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.547e-50
Identity = 97/173 (56.07%), Postives = 122/173 (70.52%), Query Frame = -1
Query:  285 EKMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 803
            +    PRVFFDI IG    GR+ +EL   + PKTAENFRALCTGEKG+G  GKPLH+KGS FHR+I  FM Q           GESIYG KF DENF++KH  P +LSMAN+GP TNGSQFFI T  TP LDGKHVVFG+V++G SV++ +E + +++ +  + V I +CG+L
Sbjct:    3 DSQRRPRVFFDIQIGNEKTGRIALELV--LVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNTQADKPVKDVTIVECGEL 173          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.245e-50
Identity = 101/175 (57.71%), Postives = 123/175 (70.29%), Query Frame = -1
Query:  285 EKMTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG-TSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVG-SESGRTSQTVVIEDCGQL 803
            +K+  P+VFFDI      KGRVV EL+ DV PKTAENFRALCTGEKG   +SGK LHYKGS FHRII +FMCQ           GESIYG KF DENF++ H  P +LSMANAG NTNGSQFFI T  TP L+GKHVVFG+V+ G S+++ +E+    E+ +  +  +I DCG+L
Sbjct:    3 DKLNRPKVFFDISADGKPKGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLERCDKGENDKPVEDWIISDCGEL 177          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.462e-50
Identity = 105/176 (59.66%), Postives = 120/176 (68.18%), Query Frame = -1
Query:  276 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG-TSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDME-KVGSESGRTSQTVVIEDCGQLADK 797
            M NPRVFFDI +     GR+V+ELFAD  PKTAENFRALCTGEKGIG  S  PLHYKGS FHRII  FMCQ           GESIYG  F DE+F  KH   G+LSMAN GPNT  SQFFI T+ TP LDGKHVVFG+VV GY+V++ ME +   +  R    V+I +CG+L  K
Sbjct:    1 MINPRVFFDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGELVLK 176          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.614e-49
Identity = 99/172 (57.56%), Postives = 119/172 (69.19%), Query Frame = -1
Query:  285 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGS-ESGRTSQTVVIEDCGQL 797
            MTNPRVFF++ IG    G++  ELFAD  PKTAENFRALCTGEKG   +G PLH+KGS+FHR+I +FM Q           GESIYG KF DE F   H  P +LSMANAGPNTNGSQFFI T +TP LD KHVVFGK++ G  +++ +E+  + E  R  Q V I DCG+L
Sbjct:    1 MTNPRVFFEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVDCGEL 172          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.753e-49
Identity = 97/163 (59.51%), Postives = 112/163 (68.71%), Query Frame = -1
Query:  291 FFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCG 779
            FFD++      GR+V +LF DV PKTA NFRALCTGEKG G       Y GSTFHR+IP FM Q           G+SIYG KF DENF +KH  PG+LSMANAGPNTNGSQFFI T  TPWLDGKHVVFG+V +G  V+K +E +GS SG T   +VI+ CG
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCG 160          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.595e-49
Identity = 102/168 (60.71%), Postives = 118/168 (70.24%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSE-SGRTSQTVVIEDCGQL 785
            +VFF I  G    GRVV EL+ D+ PKTAENFRALCTGEKGIG SGKPLHYKGS+FHR+I NFM Q           GESIYG  F DENF +KH   G LSMANAG NTNGSQFFI T +TP L+G H VFG+VV+G+ ++K +E   ++ S R     VIEDCGQL
Sbjct:    8 KVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDRSDRPKAACVIEDCGQL 174          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.595e-49
Identity = 97/166 (58.43%), Postives = 114/166 (68.67%), Query Frame = -1
Query:  285 VFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 782
            V+FD+       G++  +L+ DV PKTAENFRALCTGEKG G       YKGS FHR+IP FM Q           G+SIYG KFADENF  +H  PG+LSMANAGPNTNGSQFFI T   PWLDGKHVVFG+V DG  ++K +E  GS SG TS+ +VIE+ GQL
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSGATSKKIVIEESGQL 162          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.046e-48
Identity = 99/175 (56.57%), Postives = 121/175 (69.14%), Query Frame = -1
Query:  279 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG-TSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVG-SESGRTSQTVVIEDCGQLAD 797
            M   + F DI IG   +GR+V+EL+ DV PKTAENFR LCTGEKG+G  +G PLHYKG+ FHR+I  FM Q           GESIYG+KF DENF++KH   G+LSMAN+GPNTNGSQFFI T +T  LDGKHVVFG+V  G  V++ +E V   E    SQ VVI DCG++ +
Sbjct:    1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEIPE 175          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: PAL4A_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4A OS=Homo sapiens GN=PPIAL4A PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.044e-48
Identity = 97/170 (57.06%), Postives = 112/170 (65.88%), Query Frame = -1
Query:  288 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQ 797
            M N  +FFDI +     GR+ ++ FAD  PKTAENFRAL TGEKG         YKGS FHRIIP FMCQ            +SIYG KF DEN   KHTG GILSMANAGPNTNGSQFFICT KT WLDGKHV FGKV +  ++++ ME  G  + +TS+ + I DCGQ
Sbjct:    1 MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGF-------RYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163          
BLAST of CN184874 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 3.044e-48
Identity = 96/167 (57.49%), Postives = 114/167 (68.26%), Query Frame = -1
Query:  285 RVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGTSGKPLHYKGSTFHRIIPNFMCQXXXXXXXXXXXGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIEDCGQL 785
            +V+FD+       GRVV +L+ D+ PKTAENFRALCTGEKG G       Y GS FHR+IP+FM Q           G+SIYG KF DENFK  H  PG+LSMANAGPNTNGSQFFI T   PWLDGKHVVFG+VVDGY ++K +E +GS SG T   +V+   G+L
Sbjct:    3 QVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSGATKARIVVAKSGEL 162          
The following BLAST results are available for this feature:
BLAST of CN184874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
PPID_ASPOR5.547e-5056.07Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPID_DEBHA7.245e-5057.71Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
CYP11_RHIOR9.462e-5059.66Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPID_YARLI1.614e-4957.56Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
CYPH_SCHPO2.753e-4959.51Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPID_DICDI3.595e-4960.71Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPIA_CANAL3.595e-4958.43Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
CYP40_ARATH1.046e-4856.57Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PAL4A_HUMAN3.044e-4857.06Peptidylprolyl cis-trans isomerase A-like 4A OS=Ho... [more]
CYPH_YEAST3.044e-4857.49Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184874 ID=CN184874; Name=CN184874; organism=Citrus sinensis; type=EST; length=833bp
GAACTAAGTGGATCCCCCGCGGCTGCAGGTTTTTTTTTAACAAAAGCAAT
TTAGTCGTAGATTCATAACAAGTTCGATCCCACTTTGCTTTATAAGTGCA
TGCTGTTTTCAAAGAACCAAATAGTAGCTCTGCAACAACCTTTTTCTTCT
ATTCAGCCTAAGAAACACTAAACATCAATGACAAAATTAATAAGTTGCAG
GATTGCTGAATTTACATGTCAAACATCATCTTGACCTCACACACTATAGT
TCCCACCATATCTTTCTCATTCTCATTTATCTGCTAGCTGACCACAGTCT
TCAATCACAACTGTTTGCGAAGTCCTCCCACTCTCAGAACCCACCTTCTC
CATATCCTTGATGACACTGTAACCGTCTACCACTTTCCCAAACACAACAT
GTTTGCCATCAAGCCATGGTGTTTTCTGAGTGCATATAAAAAACTGTGAA
CCATTAGTGTTAGGTCCAGCATTAGCCATTGACAGAATTCCAGGCCCAGT
ATGCTTCATCTTGAAGTTCTCATCAGCAAACTTCATCCCATATATCGATT
CTCCTCCAGTTCCATTTCCCCGAGTGAAATCTCCCCCCTGACACATGAAG
TTAGGGATTATGCGGTGAAATGTCGAGCCCTTATAGTGTAGTGGCTTCCC
AGACGTTCCAATCCCTTTCTCACCAGTGCAGAGAGCACGGAAGTTTTCAG
CAGTTTTTGGGGTGACGTCAGCAAATAGCTCCATCACAACTCGCCCCTTG
TTCATCTTTCCAATCAGAATGTCAAAGAAAACCCTTGGATTCGTCATTTT
TTCTATCCAATCAAAAGCCTTTTGCTGTAATTC
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