CN184460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.220e-69 Identity = 127/167 (76.05%), Postives = 140/167 (83.83%), Query Frame = 1 Query: 169 MKERQRWRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKDSIRIVDPIDEHKYDQILETFAEKLVNNHS-----------FVMATSNGGFLHTD 636 MKERQRW EEDALLRAYV+Q+GP+EW VS+RMN PLNRDAKSCLERWKNYLKPGIKKGSLT+EEQ LVI LQ KHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE+K+S + V+PIDE KYD+ILE+FAEKLV S VMA SNGGFLH++ Sbjct: 1 MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEPIDESKYDRILESFAEKLVKERSNVVPAAAAAATVVMANSNGGFLHSE 167
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.213e-60 Identity = 112/150 (74.67%), Postives = 126/150 (84.00%), Query Frame = 1 Query: 169 MKERQRWRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE--QKDSIRIVDPIDEH-------KYDQILETFAEKLVNNH 591 M+ERQRWR EEDA+L AYV+QYGP+EWS VSQRMN PL+RDAKSCLERWKNYL+PGIKKGSLTD+EQ LVI LQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE +D R+ P+D +YD +LE FA+KLVN+H Sbjct: 6 MRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDRDRRRLPPPLDGDERGCAGGRYDWLLEDFADKLVNDH 155
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.639e-59 Identity = 113/160 (70.62%), Postives = 125/160 (78.12%), Query Frame = 1 Query: 169 MKERQRWRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKDSIR---IVDPIDEHKYDQILETFAEKLVNNHSFVMATSNGGFLHTDP 639 MKERQRWR EEDA+LRAYV+QYGP+EW VSQRMN L+RDAKSCLERWKNYL+PGIKKGSLT+EEQ LVI LQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE +DS R P + +Y+ +LE FAEKLV A + L P Sbjct: 1 MKERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDSRRPPPEPSPDERGRYEWLLENFAEKLVGERPQQAAAAPSPLLMAAP 160
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.723e-21 Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 157 LLLEMKERQRWRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQK 504 L+ E + W +ED LL +V +G + W FV++ LNR KSC RW NYL PG+K+G +T +E+ LV+ L AK GN+W KIA ++PGRT + +W K+ +E+K Sbjct: 3 LVQEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSG--LNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKK 116
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 187 WRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQK 504 W +ED LL +V +G + W F+++ LNR KSC RW NYL PG+K+G +T +E+ LV+ L AK GN+W KIA ++PGRT + +W K+ +E+K Sbjct: 12 WTEQEDILLVNFVHLFGDRRWDFIAKVSG--LNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKK 115
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.250e-20 Identity = 43/112 (38.39%), Postives = 69/112 (61.61%), Query Frame = 1 Query: 175 ERQRWRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKDS 510 +R W+ EED +L++YV+ +G W+ +S+R L R KSC RWKNYL+P IK+GS++ +EQ+L+I + GN+W IA +PGRT + +W K+ ++ + Sbjct: 13 KRGLWKPEEDMILKSYVETHGEGNWADISRRSG--LKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQN 122
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.250e-20 Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 160 LLEMKE---RQRWRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWW 468 LL MK+ + +W+ EED +L+ YV QYG + W+ V +R P N SC RW N+LKP +KKG TDEE+ V+ L A GNKW ++A E PGRT + +W Sbjct: 9 LLAMKKTFTKSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHN--PASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFW 112
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.245e-20 Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 151 CCLLLEMKERQRWRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 489 CC + +K+ W EED +L +Y++++GP W + NT L R +KSC RW NYL+PGIK+G T+ E+ ++IHLQA GN+W IA+ +P RT + +W +K+ Sbjct: 6 CCDKIGVKKGP-WTPEEDIILVSYIQEHGPGNWRAIPS--NTGLLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKK 115
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20 Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 187 WRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQR 495 W + EDA+L YVK++G W+ V + NT L R KSC RW N+L+P +KKG+ T EE+ L+I L +K GNKW ++AA +PGRT + +W ++ QR Sbjct: 45 WTSAEDAILVDYVKKHGEGNWNAVQK--NTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQR 145
BLAST of CN184460 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20 Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 187 WRAEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQNLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQR 495 W + EDA+L YVK++G W+ V + NT L R KSC RW N+L+P +KKG+ T EE+ L+I L +K GNKW ++AA +PGRT + +W ++ QR Sbjct: 45 WTSAEDAILVDYVKKHGEGNWNAVQK--NTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQR 145 The following BLAST results are available for this feature:
BLAST of CN184460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184460 ID=CN184460; Name=CN184460; organism=Citrus sinensis; type=EST; length=682bpback to top |