CN189154

Overview
NameCN189154
Unique NameCN189154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56
Identity = 114/152 (75.00%), Postives = 127/152 (83.55%), Query Frame = -1
Query:  250 ASKKYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 705
            + ++YLKLKARYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD L +LQ KE  L+EAN+TLKQRLMEG  +N LQ   +A+D GYG +  Q QGD FFH LECEPTLQIGYQ  DPI+V  AGPS+NNYM GWLP
Sbjct:   92 SQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPSVNNYMAGWLP 241          
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.257e-53
Identity = 108/155 (69.68%), Postives = 125/155 (80.65%), Query Frame = -1
Query:  250 ASKKYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGL-KPAQPQGDSFFHA--LECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 705
            + ++YLKLKARYE+LQRSQRNL+GE+LGPL+SK+LE+LERQLD SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG        GD  F    +ECEPTLQIGY   DP SVVTAGPS+NNYM GWLP
Sbjct:   94 SQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR-MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMNNYMGGWLP 247          
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44
Identity = 96/155 (61.94%), Postives = 118/155 (76.13%), Query Frame = -1
Query:  250 ASKKYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 705
            + ++YLKLK RY+ALQR+QRNLLGE+LGPL++KELESLERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ E+   YG    Q Q    +FF  LECEP LQIGYQ       + AGPS+NNYM GWLP
Sbjct:   94 SQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPSVNNYMLGWLP 245          
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.050e-43
Identity = 96/154 (62.34%), Postives = 116/154 (75.32%), Query Frame = -1
Query:  253 ASKKYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYM-QGWL 705
            + ++YLKLK R EALQRSQRNLLGE+LGPL SKELE LERQLD SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R  E  Q N  Q+ +PS     GYG +PAQ  G++F+H LECEPTLQIGY     ++  TA  ++NNYM  GWL
Sbjct:   90 SQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATAS-TVNNYMPPGWL 242          
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43
Identity = 96/157 (61.15%), Postives = 117/157 (74.52%), Query Frame = -1
Query:  250 ASKKYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDS---FFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 705
            + ++YLKLK RY+ALQR+QRNLLGE+LGPL++KELE LERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ ED    YG    Q Q +S   FF  LECEP LQ+GYQ       + AGPS NNYM GWLP
Sbjct:   94 SQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPSENNYMLGWLP 248          
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.812e-36
Identity = 72/89 (80.90%), Postives = 80/89 (89.89%), Query Frame = -1
Query:  439 ASKKYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 705
            + ++YLKLK RYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD LT+ Q KE  L+EAN+TLKQRLMEG Q+N
Sbjct:   92 SQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGSQLN 180          

HSP 2 Score: 31.187 bits (69), Expect = 1.812e-36
Identity = 16/31 (51.61%), Postives = 19/31 (61.29%), Query Frame = -2
Query:  327 VQKIVVMGLNQLNLRAIASFTPWNVNPHCKL 419
            + K+  M   QL LRA+ASF  W VN  CKL
Sbjct:  186 MHKLWAMAGKQLKLRAMASFILWIVNLLCKL 216          

HSP 3 Score: 21.557 bits (44), Expect = 1.812e-36
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -3
Query:  695 EALEVSSQQE 724
            EALE+SSQQE
Sbjct:   86 EALEISSQQE 95          
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.405e-32
Identity = 79/159 (49.69%), Postives = 102/159 (64.15%), Query Frame = -1
Query:  253 KKYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAE-----DCGYGLKPAQPQGDSFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 699
            ++YLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+R  +TQYMLD L++LQ KE +L +AN+ L  +L +   V    +    E     +  YG   A  QG   + +LEC+PTLQIGY     ++ ++V   G S   N Y+ GW+
Sbjct:   93 REYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGGGWEGGDQQNIAYGHPQAHSQG--LYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQGNGYIPGWM 249          
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31
Identity = 78/160 (48.75%), Postives = 102/160 (63.75%), Query Frame = -1
Query:  253 KKYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSA------EDCGYGLKPAQPQGDSFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 699
            ++YLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+RS +TQYMLD L++LQ+KEQ+L E N+ L  +L +   V +  +          ++  Y    AQ QG   +  LEC PTLQ+GY     ++ I+  T   +   N Y+ GW+
Sbjct:   93 REYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGGGGWEGGEQNVTYAHHQAQSQG--LYQPLECNPTLQMGYDNPVCSEQITATTQAQAQQGNGYIPGWM 250          
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.054e-31
Identity = 80/156 (51.28%), Postives = 104/156 (66.67%), Query Frame = -1
Query:  250 KYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPSAEDCGYGLKPAQPQ----GDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 696
            +YLKLKAR E LQR+QRNLLGE+L  L  KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E   V   Q+        GY  +P   Q    G+ FFH L+   EPTLQIGY PA+    + +   +N YM  WLP
Sbjct:   96 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQVWEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249          
BLAST of CN189154 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.054e-31
Identity = 80/156 (51.28%), Postives = 104/156 (66.67%), Query Frame = -1
Query:  250 KYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPSAEDCGYGLKPAQPQ----GDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 696
            +YLKLKAR E LQR+QRNLLGE+L  L  KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E   V   Q+        GY  +P   Q    G+ FFH L+   EPTLQIGY PA+    + +   +N YM  WLP
Sbjct:   96 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQVWEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249          
The following BLAST results are available for this feature:
BLAST of CN189154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
AGL9_PETHY1.413e-5675.00Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
MTF1_PEA3.257e-5369.68MADS-box transcription factor 1 OS=Pisum sativum G... [more]
SEP3_ARATH8.040e-4461.94Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
AGL9_ARADE1.050e-4362.34Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
AGL9_SINAL3.990e-4361.15Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_SOLLC1.812e-3680.90Agamous-like MADS-box protein AGL9 homolog OS=Sola... [more]
SEP2_ARATH5.405e-3249.69Developmental protein SEPALLATA 2 OS=Arabidopsis t... [more]
SEP1_ARATH1.204e-3148.75Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
MADS7_ORYSJ2.054e-3151.28MADS-box transcription factor 7 OS=Oryza sativa su... [more]
MADS7_ORYSI2.054e-3151.28MADS-box transcription factor 7 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001G12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189154 ID=CN189154; Name=CN189154; organism=Citrus sinensis; type=EST; length=726bp
GAGGCTCAAACAAGGCTTTGTTAAATAAAGATAAGCGCGGTGATTGAAAA
TACACGCACACACAACATAGCTATATATCGTCATCAGTTTCCCTAAAGTG
CAGGATCACTGTAGAGTTATTATAATAAATCCTTATGATTGCGTGTTCCT
AGTCACTGAATAGGGTTGCTTACAAAGGGATACAAAGTTGCTGATTCTTA
TGGATCAACTACAATACATTGACTGGTAATGCCCGCCGCTCTCTTAGCAT
GGTAGCCATCCTTGCATGTAATTATTCAGACTCGGGCCTGCTGTGACAAC
CGATATTGGGTCCGCAGGCTGGTATCCAATTTGCAATGTGGGTTCACATT
CCAAGGCGTGAAAGAAGCTATCGCCCTGAGGTTGAGCTGGTTTAAGCCCA
TAACCACAATCTTCTGCACTAGGATTCAATTGAAGTGTGTTCACTTGGTA
TCCCTCCATCAACCTTTGTTTGAGGGTCTTATTTGCTTCGCTCAGCAACT
GTTCCTTATGTTGCAGTTCAGTAAGGGTATCCAGCATGTACTGAGTTCTT
GTTGATCTGATCTGCTTCAATGACATATCAAGCTGCCTTTCAAGTGACTC
AAGCTCTTTGCTGTTTAGAGGGCCAAGTTCTTCTCCAAGGAGATTCCTTT
GGGATCTCTGTAGGGCTTCATATCGTGCTTTAAGCTTCAGATATTTCTTG
CTGGCTACTTACCTCCAGGGCCTCCC
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