CN189037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP3_ARATH (Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.282e-34 Identity = 91/259 (35.14%), Postives = 144/259 (55.60%), Query Frame = 2 Query: 14 ESLIIDASNRFFTVIPSIHPHVIRDEDDFKSKV-KMLEALQDIEIASRLVGFDVDSD---DSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAP---THTDWSLELEEVFSLEREG--EFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLG-EVYELKKAKYMDKP-PDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPS 757 E++ D S+R+F+++ S P + D ++ E ++DI ASRL+G D+ D D L ++YKKL C I+ + +SEDY+++ KYL TT+ P + ++ + ++ VF++E + D +KL N++LLW GSR +N + + +G A P GYMFG+ I +D +++A+Y FT P G ++L+ LG EV E K D K KGLG+ +ES+ WRDD+ VPCG+ PS Sbjct: 519 EAMWADFSSRWFSLMHSTRPMRLHDVNELADHAASAFETVRDINTASRLIG-DMRGDTLDDPLSDRYKKLGCKISVVDKESEDYKMVVKYLETTYEPVKVSDVEYGVSVQNVFAVESDAIPSLDDI----KKLPNKVLLWCGSRSSNLLRHIYKGFLPAVCSLPVPGYMFGRAIVCSDAAAEAARYGFTAVDRPEGFLVLAVASLGEEVTEFTSPPEDTKTLEDKKIGVKGLGRKKTEESEHFMWRDDIKVPCGRLVPS 772
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP3_MEDTR (Putative poly [ADP-ribose] polymerase 3 OS=Medicago truncatula GN=PARP3 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 93/254 (36.61%), Postives = 134/254 (52.76%), Query Frame = 2 Query: 29 DASNRFFTVIPSIHPHVIRDEDDFKSKVKM-LEALQDIEIASRLVGFDVDS--DDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHT---DWSLELEEVFSLEREGEFDKFSSYQR--KLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLG-EVYELKKAKYMDKPPDG-------KHSTKGLGKTVPQESDFVKWRDDVTVPCG 742 D S ++FT++ S P + RD + LE ++DI +AS L+G S DD L + YKKL C I PL +S DY++I KYL T+ P ++ + +E +F++E SY K+ N++LLW GSR +N + L +G A P GYMFGK I +D +++A+Y FT P G ++L+ LG E+ ELK PP+ K KGLGK ES+ W+DD+ VPCG Sbjct: 510 DFSQKWFTLMHSTRPFIFRDYQEIADHAAAALEGVRDITLASHLIGDMSGSTIDDPLSDTYKKLGCSITPLEKNSNDYEMIVKYLEKTYEPVKVGDIEYGVSVENIFTVESSA----CPSYADIVKMPNKVLLWCGSRSSNLLRHLHKGFLPAICSLPVPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLGNEITELK------SPPEDTTSLEEKKVGVKGLGKKKTDESEHFVWKDDIKVPCG 753
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP3_SOYBN (Poly [ADP-ribose] polymerase 3 OS=Glycine max GN=PARP3 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.308e-34 Identity = 95/259 (36.68%), Postives = 138/259 (53.28%), Query Frame = 2 Query: 14 ESLIIDASNRFFTVIPSIHPHVIRDEDDFKSKVKM-LEALQDIEIASRLVGFDVDS--DDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHT---DWSLELEEVFSLEREGEFDKFSSYQR--KLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLG-EVYELK-KAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSN 760 E++ D S R+FT++ S P RD + LE ++DI AS L+G S DD L E YKKL C I+ L S+DY++I KYL T+ P ++ + +E +F+++ G SY+ KL N++LLW GSR +N + L +G A P GYMFGK I +D +++A+Y FT P G ++L+ LG E+ ELK + + K KG GK ES+ W+DD+ VPCGK S+ Sbjct: 518 EAVWTDFSQRWFTLMHSTRPFNFRDYQEIADHAAAALEGVRDITQASHLIGDMTGSTIDDPLSETYKKLGCSISALDKSSDDYEMIVKYLEKTYEPVKVGDIEYGVSVENIFAVQTGG----CPSYEDIIKLPNKVLLWCGSRSSNLLRHLQKGFLPAICSLPIPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLGNEITELKTPPEDASSLEEKKVGVKGPGKKKTDESEHFVWKDDIKVPCGKLVASD 772
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_ONCMA (Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncorhynchus masou GN=parp1 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.263e-31 Identity = 68/136 (50.00%), Postives = 96/136 (70.59%), Query Frame = 2 Query: 101 KSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGK 502 ++KV+ML+ L DIE+A L+ G + + D +D Y+KL+ I + +++ ++I +Y+ THA TH ++L +EE+F + REGE+ K+ +Q L NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGK Sbjct: 1 QAKVEMLDNLLDIEVAYSLLKGGAEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKNTHAATHNTYTLVVEEIFKIVREGEYQKYRPFQ-DLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGK 135
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP3_HUMAN (Poly [ADP-ribose] polymerase 3 OS=Homo sapiens GN=PARP3 PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 3.499e-24 Identity = 88/262 (33.59%), Postives = 123/262 (46.95%), Query Frame = 2 Query: 29 DASNRFFTVIPS----IHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDSDD------SLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTT----HAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDK--KNPVGLMLLSEVGLGEVYELKKAK-YMDKPPDGKHSTKGLGKTVP---QESDFVKWRDDVTVPCGKPAP 754 + S+ F+TVIP P I + ++K ML L DIE+A L LD Y+ L+C + L + +Y++I+ YL T PT L+ ++ + +EGE D+F ++ KL NR LLWHG+ + IL+ GLRI P +G GKGIYFA SKSA Y K + VG M L EV LG + + + PP G S G T P Q+++ V VP G+P P Sbjct: 252 ELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRCPT-------LQHIWKVNQEGEEDRFQAHS-KLGNRKLLWHGTNMAVVAAILTSGLRI----MPHSGGRVGKGIYFASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVP 501
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP4_HUMAN (Poly [ADP-ribose] polymerase 4 OS=Homo sapiens GN=PARP4 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.740e-13 Identity = 53/177 (29.94%), Postives = 89/177 (50.28%), Query Frame = 2 Query: 197 KYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYM------FGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKY-MDKPPDGKHSTKGLGKTVPQESDF 706 KY+ LRC I + ++E++ + K + H H+ +++ ++F + R E +F S KL N L HGS + N VGIL +GL + P G G GIYF+D +S S +Y + + L+L+ +V LG+ +L + + + + P G S G+ +T +DF Sbjct: 374 KYRALRCKIEHVEQNTEEFLRVRKEVLQNH---HSKSPVDVLQIFRVGRVNETTEFLS---KLGNVRPLLHGSPVQNIVGILCRGL-LLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSIKYSHPGETDGTRLLLICDVALGKCMDLHEKDFSLTEAPPGYDSVHGVSQTASVTTDF 543
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PME5_CAEEL (Poly(ADP-ribose) polymerase pme-5 OS=Caenorhabditis elegans GN=pme-5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.085e-13 Identity = 54/175 (30.86%), Postives = 82/175 (46.86%), Query Frame = 2 Query: 119 LEALQDIEIASRLV-GFDVDSD-DSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAP-THTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKY 634 L Q+IE A+RL+ + D D +D ++C+ DS+ Q + +++H + LE+ + S E+ F+ F + N+ LWHG++ TN + IL G I PP A G +FG GIY AD KS YC + ML+ + LG+V L Y Sbjct: 2031 LNRCQEIETATRLLCAAEFRQDLDRVDYIRSAIQCEYRLETPDSDISQRLLQWIHNSGGKQAKVKMILEISPMLSTEK---FEPFVNDD----NQKFLWHGTKATNLMSILKNGFLIDPPSACKNGNLFGSGIYLADSFEKSTHYC-QPSAGGINYMLVCQTALGKVRTLDTIPY 2197 The following BLAST results are available for this feature:
BLAST of CN189037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189037 ID=CN189037; Name=CN189037; organism=Citrus sinensis; type=EST; length=767bpback to top |