CN189037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_ARATH (Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1 PE=1 SV=2) HSP 1 Score: 452.595 bits (1163), Expect = 1.092e-126 Identity = 213/254 (83.86%), Postives = 239/254 (94.09%), Query Frame = 2 Query: 5 SVKESLIIDASNRFFTVIPSIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVR 766 ++KESL++DASNRFFT+IPSIHPH+IRDEDDFKSKVKMLEALQDIEIASR+VGFDVDS +SLD+KYKKL CDI+PLPHDSEDY+LIEKYL+TTHAPTHT+WSLELEEVF+LEREGEFDK++ ++ KL N+MLLWHGSRLTNFVGIL+QGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYC+T KKNPVGLMLLSEV LGE++EL KAKYMDKPP GKHSTKGLGK VPQ+S+F KWR DVTVPCGKP S V+ Sbjct: 699 TMKESLLVDASNRFFTMIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRIVGFDVDSTESLDDKYKKLHCDISPLPHDSEDYRLIEKYLNTTHAPTHTEWSLELEEVFALEREGEFDKYAPHREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTCKKNPVGLMLLSEVALGEIHELTKAKYMDKPPRGKHSTKGLGKKVPQDSEFAKWRGDVTVPCGKPVSSKVK 952
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_ORYSJ (Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica GN=PARP1 PE=2 SV=1) HSP 1 Score: 427.557 bits (1098), Expect = 3.762e-119 Identity = 199/255 (78.04%), Postives = 229/255 (89.80%), Query Frame = 2 Query: 2 VSVKESLIIDASNRFFTVIPSIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVR 766 ++V+ESLI+ ASNRFFT+IPSIHPH+I+DEDD KVKMLEALQDIEIAS+LVGFD D+D+SLD+KYKKLRC I PLPHD EDY+L+EKYL THAPTH +WSLELEEVFSL+R+GEF K+S Y+ L N+MLLWHGSRLTN+VGILSQGLRIAPPEAP TGYMFGKG+YFADLVSKSAQYC+ D+KNPVGLMLLSEV LG++YELKKA MDKPP GKHSTKGLGKTVP ES+F KWRDDV VPCGKP P++++ Sbjct: 692 LAVRESLIVAASNRFFTLIPSIHPHIIQDEDDLMVKVKMLEALQDIEIASKLVGFDSDNDESLDDKYKKLRCAITPLPHDCEDYKLVEKYLLNTHAPTHKEWSLELEEVFSLDRDGEFSKYSRYKNNLHNKMLLWHGSRLTNYVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRKNPVGLMLLSEVALGDMYELKKATSMDKPPRGKHSTKGLGKTVPLESEFAKWRDDVVVPCGKPVPASIK 946
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_MAIZE (Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1) HSP 1 Score: 427.172 bits (1097), Expect = 4.914e-119 Identity = 201/255 (78.82%), Postives = 227/255 (89.02%), Query Frame = 2 Query: 2 VSVKESLIIDASNRFFTVIPSIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVR 766 ++V+ESLI+ ASNRFFT+IPSIHPH+IRDEDD K KMLEALQDIEIAS++VGFD DSD+SLD+KY KL CDI PL HDSEDY+LIE+YL THAPTH DWSLELEEVFSL+R+GE +K+S Y+ L N+MLLWHGSRLTNFVGILSQGLRIAPPEAP TGYMFGKG+YFADLVSKSAQYC+ D+ NPVGLMLLSEV LG++YELKKA MDKPP GKHSTKGLGKTVP ES+FVKWRDDV VPCGKP PS++R Sbjct: 695 LAVRESLIVAASNRFFTLIPSIHPHIIRDEDDLMIKAKMLEALQDIEIASKIVGFDSDSDESLDDKYMKLHCDITPLAHDSEDYKLIEQYLLNTHAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKMLLWHGSRLTNFVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRNNPVGLMLLSEVALGDMYELKKATSMDKPPRGKHSTKGLGKTVPLESEFVKWRDDVVVPCGKPVPSSIR 949
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_RAT (Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=2 SV=4) HSP 1 Score: 262.692 bits (670), Expect = 1.603e-69 Identity = 138/256 (53.91%), Postives = 176/256 (68.75%), Query Frame = 2 Query: 14 ESLIIDASNRFFTVIPSIH----PHVIRDEDDFKSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNV 763 ES I+D SNRF+T+IP P ++ + D ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I KY+ THA TH + LE+ ++F +EREGE ++ + R+L NR LLWHGSR TNF GILSQGLRIAPPEAP TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL EV LG +YELK A ++ K P GKHS KGLGKT P S + D V VP G PS V Sbjct: 726 ESQILDLSNRFYTLIPHDFGMKKPPLLNNTDSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPF-RQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTAPDPSASIT-LDGVEVPLGTGIPSGV 979
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_MOUSE (Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3) HSP 1 Score: 260.381 bits (664), Expect = 7.955e-69 Identity = 136/256 (53.12%), Postives = 176/256 (68.75%), Query Frame = 2 Query: 14 ESLIIDASNRFFTVIPSIH----PHVIRDEDDFKSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNV 763 ES I+D SNRF+T+IP P ++ + D ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I KY+ THA TH + LE+ ++F +EREGE ++ + R+L NR LLWHGSR TNF GILSQGLRIAPPEAP TGYMFGKGIYFAD+VSKSA YC T + +P+GL++L EV LG +YELK A ++ K P GKHS KGLGKT P S + + V VP G PS V Sbjct: 725 ESQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPF-RQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLIMLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSASIT-LEGVEVPLGTGIPSGV 978
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_CRIGR (Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2 SV=3) HSP 1 Score: 259.225 bits (661), Expect = 1.772e-68 Identity = 135/256 (52.73%), Postives = 176/256 (68.75%), Query Frame = 2 Query: 14 ESLIIDASNRFFTVIPSIH----PHVIRDEDDFKSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNV 763 +S I+D SNRF+T+IP P ++ + D ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I KY+ THA TH + LE+ ++F +EREGE ++ + ++L NR LLWHGSR TNF GILSQGLRIAPPEAP TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL EV LG +YELK A ++ K P GKHS KGLGKT P S + + V VP G PS V Sbjct: 725 DSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTHNAYDLEVMDIFKIEREGESQRYKPF-KQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSASIT-LEGVEVPLGTGIPSGV 978
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_HUMAN (Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4) HSP 1 Score: 257.684 bits (657), Expect = 5.156e-68 Identity = 135/256 (52.73%), Postives = 175/256 (68.36%), Query Frame = 2 Query: 14 ESLIIDASNRFFTVIPSIH----PHVIRDEDDFKSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNV 763 +S I+D SNRF+T+IP P ++ + D ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I KY+ THA TH + LE+ ++F +EREGE ++ + ++L NR LLWHGSR TNF GILSQGLRIAPPEAP TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL EV LG +YELK A ++ K P GKHS KGLGKT P S + D V VP G S V Sbjct: 726 DSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPF-KQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSANIS-LDGVDVPLGTGISSGV 979
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_BOVIN (Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2) HSP 1 Score: 254.218 bits (648), Expect = 5.701e-67 Identity = 133/256 (51.95%), Postives = 175/256 (68.36%), Query Frame = 2 Query: 14 ESLIIDASNRFFTVIPSIH----PHVIRDEDDFKSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNV 763 +S I+D SNRF+T+IP P ++ + + ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I KY+ THA TH + LE+ ++F +EREGE ++ + ++L NR LLWHGSR TNF GILSQGLRIAPPEAP TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL E LG +YELK A+++ K P GKHS KGLGKT P S + D V VP G S V Sbjct: 728 DSHILDLSNRFYTLIPHDFGMKKPPLLNNANSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDKDSEEAEIIRKYVKNTHATTHNAYDLEVVDIFKIEREGESQRYKPF-KQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEAALGNMYELKHARHISKLPKGKHSVKGLGKTTPDPSASIT-VDGVEVPLGTGISSGV 981
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_CHICK (Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2) HSP 1 Score: 248.825 bits (634), Expect = 2.395e-65 Identity = 133/249 (53.41%), Postives = 174/249 (69.88%), Query Frame = 2 Query: 14 ESLIIDASNRFFTVIPSIH----PHVIRDEDDFKSKVKMLEALQDIEIA-SRLVGFDVDSD-DSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCG 742 ES I+D SNRF+T+IP P ++ + + ++KV+ML+ L DIE+A S L G + D D D +D Y+KLR DI + DSE+ ++I++Y+ THA TH + L++ E+F +EREGE ++ + ++L NR LLWHGSR TNF GILSQGLRIAPPEAP TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL EV LG +YELK A ++ K P GKHS KGLGKT P + D V VP G Sbjct: 723 ESQILDLSNRFYTLIPHDFGMKKPPLLSNLEYIQAKVQMLDNLLDIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSEEAKIIKQYVKNTHAATHNAYDLKVVEIFRIEREGESQRYKPF-KQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQADPIGLILLGEVALGNMYELKNASHITKLPKGKHSVKGLGKTAP-DPTATTTLDGVEVPLG 969
BLAST of CN189037 vs. ExPASy Swiss-Prot
Match: PARP1_XENLA (Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis GN=parp1 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.969e-65 Identity = 129/259 (49.81%), Postives = 177/259 (68.34%), Query Frame = 2 Query: 5 SVKESLIIDASNRFFTVIPSIH----PHVIRDEDDFKSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIEKYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNV 763 S+ E+ ++D SN+F+T+IP P ++ + + ++KV+ML+ L DIE+A L+ G D D +D KY+K++ DI + DSE+ ++I Y+ THA TH + LE+ E+F ++REGE+ ++ + ++L NR LLWHGSR TNF GILSQGLRIAPPEAP TGYMFGKGIYFAD+VSKSA YC +P+GL+LL EV LG ++ELK A + K P GKHS KGLG+T P S V+ D V VP GK +N+ Sbjct: 706 SLSEARLLDLSNQFYTLIPHDFGMKKPPLLNNLEYIQAKVQMLDNLLDIEVAYSLLRGGADDGEKDPIDVKYEKIKTDIKVVAKDSEESRIICDYVKNTHADTHNAYDLEVLEIFKIDREGEYQRYKPF-KQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHAMPGSPIGLILLGEVALGNMHELKAASQITKLPKGKHSVKGLGRTAPDPSATVQ-LDGVDVPLGKGTSANI 962 The following BLAST results are available for this feature:
BLAST of CN189037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189037 ID=CN189037; Name=CN189037; organism=Citrus sinensis; type=EST; length=767bpback to top |