CN188923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB2_TOBAC (Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.283e-56 Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = -3 Query: 207 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 563 KVE LP+KI+LLNNQHLGMV+QWEDRFYKANRAHTYLG+PS E+EIFPNMLKFAEACG+ A+VT + DLRAAIQ MLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR+ Y Sbjct: 546 KVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 664
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB1_TOBAC (Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.283e-56 Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = -3 Query: 207 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 563 KVE LP+KI+LLNNQHLGMV+QWEDRFYKANRAHTYLG+PS E+EIFPNMLKFAEACG+ A+VT + DLRAAIQ MLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR+ Y Sbjct: 549 KVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 667
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB3_BRANA (Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 4.288e-56 Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = -3 Query: 207 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 563 +VE LP+KILLLNNQHLGMVMQWEDRFYKANRAHTYLGDP+RE+EIFPNML+FA ACGI A+VT+K +LR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y Sbjct: 534 RVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 652
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB1_BRANA (Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 4.288e-56 Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = -3 Query: 207 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 563 +VE LP+KILLLNNQHLGMVMQWEDRFYKANRAHTYLGDP+RE+EIFPNML+FA ACGI A+VT+K +LR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y Sbjct: 537 RVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 655
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB_ARATH (Acetolactate synthase, chloroplastic OS=Arabidopsis thaliana GN=CSR 1.2 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.802e-54 Identity = 99/119 (83.19%), Postives = 108/119 (90.76%), Query Frame = -3 Query: 207 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 563 +VE LP+K+LLLNNQHLGMVMQWEDRFYKANRAHT+LGDP++E EIFPNML FA ACGI A+VT+KADLR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG F DVITEGDGR +Y Sbjct: 552 RVENLPVKVLLLNNQHLGMVMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVTKKADLREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFNDVITEGDGRIKY 670
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB1_ORYSJ (Acetolactate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS1 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.080e-46 Identity = 82/119 (68.91%), Postives = 104/119 (87.39%), Query Frame = -3 Query: 207 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 563 ++E LP+K+++LNNQHLGMV+QWEDRFYKANRAHTYLG+P ESEI+P+ + A+ I +VT+K+++RAAI+ ML+TPGPYLLD+IVPHQEHVLPMIPSGGAFKD+I +GDGRT Y Sbjct: 526 RIENLPVKVMVLNNQHLGMVVQWEDRFYKANRAHTYLGNPECESEIYPDFVTIAKGFNIPAVRVTKKSEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 644
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB1_MAIZE (Acetolactate synthase 1, chloroplastic OS=Zea mays GN=ALS1 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.254e-46 Identity = 82/119 (68.91%), Postives = 102/119 (85.71%), Query Frame = -3 Query: 207 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 563 ++E LP+K+ +LNNQHLGMV+QWEDRFYKANRAHTYLG+P ESEI+P+ + A+ I +VT+K ++RAAI+ ML+TPGPYLLD+IVPHQEHVLPMIPSGGAFKD+I +GDGRT Y Sbjct: 520 RIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTYLGNPENESEIYPDFVTIAKGFNIPAVRVTKKNEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB2_MAIZE (Acetolactate synthase 2, chloroplastic OS=Zea mays GN=ALS2 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 9.909e-45 Identity = 79/119 (66.39%), Postives = 101/119 (84.87%), Query Frame = -3 Query: 207 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 563 ++E LP+K+ +LNNQHLGMV+QWEDRFYKANRAHT+LG+P ESEI+P+ + A+ I +VT+K+++ AAI+ ML+ PGPYLLD+IVPHQEHVLPMIPSGGAFKD+I +GDGRT Y Sbjct: 520 RIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTFLGNPENESEIYPDFVAIAKGFNIPAVRVTKKSEVHAAIKKMLEAPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB2_BRANA (Acetolactate synthase 2, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.582e-42 Identity = 76/110 (69.09%), Postives = 94/110 (85.45%), Query Frame = -3 Query: 234 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVI 563 +VE LP+K+LL+NNQHLGMV+QWED FY ANRA ++LGDP+ +FP+ML FA +CGI A+VTR+ DLR AIQTMLDTPGP+LLDV+ PHQ+HVLP+IPSGG FKD+I Sbjct: 527 RVENLPVKVLLINNQHLGMVLQWEDHFYAANRADSFLGDPANPEAVFPDMLLFAASCGIPAARVTRREDLREAIQTMLDTPGPFLLDVVCPHQDHVLPLIPSGGTFKDII 636
BLAST of CN188923 vs. ExPASy Swiss-Prot
Match: ILVB2_ORYSJ (Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 PE=2 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 2.066e-42 Identity = 77/121 (63.64%), Postives = 99/121 (81.82%), Query Frame = -3 Query: 207 KVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRES--EIFPNMLKFAEACGILGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 563 +VE LP+K+++LNNQHLGMV+QWEDRFY ANRAHTYLG+P+ E++P+ + A GI A+VTRK ++RAA++ M+ PGPYLLDV+VPHQEHVLPMIPS GAFKD+I +GDGR+ Y Sbjct: 543 RVEDLPVKVMVLNNQHLGMVVQWEDRFYDANRAHTYLGNPAANGGGEVYPDFVTIAGGFGIPAARVTRKGEVRAAVEEMMAAPGPYLLDVVVPHQEHVLPMIPSNGAFKDIIVDGDGRSSY 663 The following BLAST results are available for this feature:
BLAST of CN188923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188923 ID=CN188923; Name=CN188923; organism=Citrus sinensis; type=EST; length=565bpback to top |