CN188714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: YY46_ANASP (Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13 Identity = 51/181 (28.18%), Postives = 86/181 (47.51%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 545 +R+ + S K L +GH+S+VN +F DGS + + SSD TV++W++ S+ CL TF +G + VNSV NPD ++ + +S + K + + + +P G + D+ + + S K H + H V VT P +LA+ +D T++LW Sbjct: 1182 VRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTF------QGHTSWVNSVVF---NPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLW 1353 HSP 2 Score: 74.7146 bits (182), Expect = 4.850e-13 Identity = 52/181 (28.73%), Postives = 86/181 (47.51%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 545 +R+ + S K L F+GH+S+VN +F DGS + + SSD TV++WD+ S+ CL TF +G VNSV NPD ++ + + + + K + + + SP G + +D+ + +S SG+ + H V V P +LA+ D T++LW Sbjct: 1224 VRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTF------QGHTNWVNSVAF---NPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLW 1395 HSP 3 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 50/184 (27.17%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT---PQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 545 +R+ + S K L+ F+GH+++VN F DGS + + S D TV++W++ S+ CL TF+ G + V+SV +PD ++ + + + G+ + +F G + SP G + D+ + +S SGK + ++ H V + P LLA+ +D T++LW Sbjct: 1266 VRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQ------GHTSWVSSVTF---SPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVI---FSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLW 1437 HSP 4 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 47/182 (25.82%), Postives = 85/182 (46.70%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 548 +R+ + S K L +GH+++VN F+ DG+ + + S D TV++WD+ S+ CL L+G + VNSV NPD + + +S + + K + + + +P G + D+ + + S K H + H V V +P ++LA+ D T++LW+ Sbjct: 1140 VRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYI------LQGHTSWVNSVVF---NPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWE 1312
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-PQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLWK 548 +RI +K+GK L HS V+ F DGS +V++S D ++WD S CL+T L D S F N +I+ +++ + +G+ +K+++ K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N++A+ D T+KLWK Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-PQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLWK 548 +RI +K+GK L HS V+ F DGS +V++S D ++WD S CL+T L D S F N +I+ +++ + +G+ +K+++ K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N++A+ D T+KLWK Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-PQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLWK 548 +RI +K+GK L HS V+ F DGS +V++S D ++WD S CL+T L D S F N +I+ +++ + +G+ +K+++ K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N++A+ D T+KLWK Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-PQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLWK 548 +RI +K+GK L HS V+ F DGS +V++S D ++WD S CL+T L D S F N +I+ +++ + +G+ +K+++ K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N++A+ D T+KLWK Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-PQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLWK 548 +RI +K+GK L HS V+ F DGS +V++S D ++WD S CL+T L D S F N +I+ +++ + +G+ +K+++ K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N++A+ D T+KLWK Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13 Identity = 52/185 (28.11%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-PQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLWK 548 +RI +++GK L HS V+ F DGS +V++S D ++WD S CL+T L D S F N +I+ +++ + +G+ +K+++ K E A G+WI ED +Y ++ QS ++ ++ H V+ HP N++A+ D T+KLWK Sbjct: 180 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWK 358
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: Y163_SYNY3 (Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis sp. (strain PCC 6803) GN=sll0163 PE=4 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11 Identity = 50/178 (28.09%), Postives = 79/178 (44.38%), Query Frame = 3 Query: 21 KSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGK---REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 545 K G LL RGH V DA F+ DG V T S+D T + WD+ D + L G V + H PK D ++ ++ + + T +G+ V + + REG SP G+WI D+ ++ KL +++ H+ V+ V P + T +D T ++W Sbjct: 1289 KEGTLLTILRGHQKEVYDADFSADGRFVFTVSADQTARQWDISQKDTI-------TLTGHSHWVRNAHFNPKG-DRLLTVSRDKTARLWTTEGECVAVLADHQGWVREGQ------FSPDGQWIVTGSADKTAQLWNVLGKKLT-VLRGHQDAVLNVRFSPDSQYIVTASKDGTARVW 1451
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 51/184 (27.72%), Postives = 85/184 (46.20%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-PQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLW 545 ++I +K+GK L HS V+ F GS +V+ S D ++WD S CL+T L D S F N +I+ +++ + +G+ +K+++ K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP NL+A+ D T+KLW Sbjct: 149 VKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKT------LVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAALENDKTIKLW 326
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 51/184 (27.72%), Postives = 85/184 (46.20%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-PQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLW 545 ++I +K+GK L HS V+ F GS +V+ S D ++WD S CL+T L D S F N +I+ +++ + +G+ +K+++ K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP NL+A+ D T+KLW Sbjct: 149 VKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKT------LVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAALENDKTIKLW 326 The following BLAST results are available for this feature:
BLAST of CN188714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188714 ID=CN188714; Name=CN188714; organism=Citrus sinensis; type=EST; length=671bpback to top |