CN188714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_RAT (WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.093e-68 Identity = 117/183 (63.93%), Postives = 145/183 (79.23%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 551 +RIHGLKSGK L FRGHSS+VN+A FT DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++++ IM QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE + VHEKDVIG+ HHPH+NL+ATY ED +KLWKP Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_MOUSE (WD40 repeat-containing protein SMU1 OS=Mus musculus GN=Smu1 PE=2 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 3.093e-68 Identity = 117/183 (63.93%), Postives = 145/183 (79.23%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 551 +RIHGLKSGK L FRGHSS+VN+A FT DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++++ IM QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE + VHEKDVIG+ HHPH+NL+ATY ED +KLWKP Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_HUMAN (WD40 repeat-containing protein SMU1 OS=Homo sapiens GN=SMU1 PE=1 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 3.093e-68 Identity = 117/183 (63.93%), Postives = 145/183 (79.23%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 551 +RIHGLKSGK L FRGHSS+VN+A FT DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++++ IM QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE + VHEKDVIG+ HHPH+NL+ATY ED +KLWKP Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_CRIGR (WD40 repeat-containing protein SMU1 OS=Cricetulus griseus GN=SMU1 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.093e-68 Identity = 117/183 (63.93%), Postives = 145/183 (79.23%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 551 +RIHGLKSGK L FRGHSS+VN+A FT DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++++ IM QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE + VHEKDVIG+ HHPH+NL+ATY ED +KLWKP Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_CHICK (WD40 repeat-containing protein SMU1 OS=Gallus gallus GN=SMU1 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.093e-68 Identity = 118/183 (64.48%), Postives = 145/183 (79.23%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 551 +RIHGLKSGK L FRGHSS+VN+A FT DG +++ASSD TVKVW++K+T+C TFK G D +VNSV L PKNP+H VVCN+++++ IM QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE + VHEKDVIG+ HHPH+NL+ATY ED +KLWKP Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_BOVIN (WD40 repeat-containing protein SMU1 OS=Bos taurus GN=SMU1 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.093e-68 Identity = 117/183 (63.93%), Postives = 145/183 (79.23%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 551 +RIHGLKSGK L FRGHSS+VN+A FT DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++++ IM QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE + VHEKDVIG+ HHPH+NL+ATY ED +KLWKP Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_XENLA (WD40 repeat-containing protein SMU1 OS=Xenopus laevis GN=smu1 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.175e-67 Identity = 116/183 (63.39%), Postives = 144/183 (78.69%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 551 +RIHGLKSGK L FRGHSS+VN+A FT DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++++ IM QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE + VHEKDVIG+ HHPH+NL+ TY ED +KLWKP Sbjct: 331 IRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP 513
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_XENTR (WD40 repeat-containing protein SMU1 OS=Xenopus tropicalis GN=smu1 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.535e-67 Identity = 115/183 (62.84%), Postives = 144/183 (78.69%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 551 +R+HGLKSGK L FRGHSS+VN+A FT DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++++ IM QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE + VHEKDVIG+ HHPH+NL+ TY ED +KLWKP Sbjct: 331 IRVHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP 513
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_DANRE (WD40 repeat-containing protein SMU1 OS=Danio rerio GN=smu1 PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.697e-66 Identity = 115/183 (62.84%), Postives = 142/183 (77.60%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 551 +RIHGLKSGK L FRGHSS+VN+A T DG ++ASSD TVKVW++K+T+C TFK G D +VN+V L PKNP+H VVCN+++++ IM QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE + VHEKDVIG+ HHPH+NL+ TY ED +KLWKP Sbjct: 331 IRIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDYVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP 513
BLAST of CN188714 vs. ExPASy Swiss-Prot
Match: SMU1_DICDI (WD40 repeat-containing protein smu1 OS=Dictyostelium discoideum GN=smu1 PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 6.494e-42 Identity = 83/183 (45.36%), Postives = 119/183 (65.03%), Query Frame = 3 Query: 3 LRIHGLKSGKLLNYFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTPQGQVV-KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 548 L+IHGLKSGK L FRGH S+VND F +D RV++ SSD +K+WD KS+DCLQT P + D S+ S+ + KNP+ ++VCN +S I I++ + Q + K+F+S F+ +SP ++Y V ED LY F SG L + K+H+++VI ++HHP +NLLAT G DC +K+WK Sbjct: 342 LKIHGLKSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDISIRSITILLKNPEFLLVCN-SSQISIVSMKSQTISKTFTS--ENSKTFLVCTLSPLQNYLYAVDEDNILYTFDFNSGSLLNKFKIHDQEVISISHHPTKNLLATTGSDCLLKIWK 521 The following BLAST results are available for this feature:
BLAST of CN188714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188714 ID=CN188714; Name=CN188714; organism=Citrus sinensis; type=EST; length=671bpback to top |