CN188703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_CANAL (40S ribosomal protein S16 OS=Candida albicans GN=RPS16 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.739e-23 Identity = 50/86 (58.14%), Postives = 66/86 (76.74%), Query Frame = 1 Query: 82 TESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 T+SVQ F +K TA AV + K G+GLIKING PI LV P ILRFK +EP+ L+G +F G+D++++ GGGH SQ+YAIRQ+I+K L Sbjct: 3 TQSVQTFGKKKTATAVAHVKAGKGLIKINGSPITLVQPEILRFKVYEPLTLVGLDKFQGIDIRVKVTGGGHVSQVYAIRQAIAKGL 88
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_YEAST (40S ribosomal protein S16 OS=Saccharomyces cerevisiae GN=RPS16A PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.127e-22 Identity = 48/84 (57.14%), Postives = 66/84 (78.57%), Query Frame = 1 Query: 88 SVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 SVQ F +K +A AV + K G+GLIK+NG PI LV+P ILRFK +EP+LL+G +F+ +D+++R GGGH SQ+YAIRQ+I+K L Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGL 89
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_DEBHA (40S ribosomal protein S16 OS=Debaryomyces hansenii GN=RPS16 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.472e-22 Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 82 TESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 T SVQ F +K TA AV + K G+GLIK+NG PI LV P ILRFK +EP+ L+G +F +D++++ GGGH SQ+YAIRQ+I+K L Sbjct: 3 TPSVQTFGKKKTATAVAHVKAGKGLIKVNGAPITLVQPEILRFKVYEPLTLVGLDKFQNIDIRVKVSGGGHVSQVYAIRQAIAKGL 88
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_SACEX (40S ribosomal protein S16 OS=Saccharomyces exiguus GN=RPS16 PE=3 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 1.923e-22 Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 1 Query: 88 SVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 SVQ F +K +A AV + K G+GLIK+NG PI LV P ILRFK +EP+LL+G +F +D+++R GGGH SQ+YAIRQ+I+K L Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGAPITLVQPEILRFKVYEPLLLVGLDKFTNIDIRVRVTGGGHVSQVYAIRQAIAKGL 89
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_LUPPO (40S ribosomal protein S16 OS=Lupinus polyphyllus GN=RPS16 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.923e-22 Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = 1 Query: 151 GLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 GLIKING PIELV+P ILRFKAFEPILLLG+ RF GVDM+IR +GGGHTSQIYAIRQSI+K+L Sbjct: 29 GLIKINGSPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKAL 91
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_CANGA (40S ribosomal protein S16 OS=Candida glabrata GN=RPS16 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.511e-22 Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = 1 Query: 88 SVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 SVQ F +K +A AV + K G+GLIK+NG PI LV+P ILRFK +EP+LL+G +F +D+++R GGGH SQ+YAIRQ+I+K L Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFANIDIRVRVTGGGHVSQVYAIRQAIAKGL 89
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_ASHGO (40S ribosomal protein S16 OS=Ashbya gossypii GN=RPS16 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.283e-22 Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 1 Query: 88 SVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 SVQ F +K +A AV + K G+GLIK+NG PI LV P ILRFK +EP+LL+G +F +D+++R GGGH SQ+YAIRQ+I+K L Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVQPEILRFKVYEPLLLVGLDKFANIDIRVRVTGGGHVSQVYAIRQAIAKGL 89
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_KLULA (40S ribosomal protein S16 OS=Kluyveromyces lactis GN=RPS16 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.542e-22 Identity = 47/84 (55.95%), Postives = 64/84 (76.19%), Query Frame = 1 Query: 88 SVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 SVQ F +K +A AV + K G+GLIK+NG PI LV P ILRFK +EP+LL+G +F +D++++ GGGH SQ+YAIRQ+I+K L Sbjct: 6 SVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVQPEILRFKVYEPLLLVGLDKFANIDIRVKVTGGGHVSQVYAIRQAIAKGL 89
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_NEUCR (40S ribosomal protein S16 OS=Neurospora crassa GN=rps-16 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.055e-20 Identity = 45/86 (52.33%), Postives = 65/86 (75.58%), Query Frame = 1 Query: 82 TESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 T++VQ F +K A AV C +G+GLIK+NG P++L P ILR K +EPILLLG +F VD++++ GGGH SQ+YA+RQ+I+K++ Sbjct: 3 TQAVQVFGKKKNATAVARCVQGKGLIKVNGVPLKLYAPEILRAKLYEPILLLGTDKFAEVDIRLKVSGGGHVSQVYAVRQAIAKAI 88
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_DICDI (40S ribosomal protein S16 OS=Dictyostelium discoideum GN=rps16 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.800e-20 Identity = 44/93 (47.31%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 61 LATAAPKTESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 ++ AP+ VQ +K TAVAV Y G+GLIK+NG P+E + P L+ K +EP+L++G+ F+ VD+++R +GGG +QIYAIRQ+I+KS+ Sbjct: 1 MSAVAPQKNVVQTHGKKRTAVAVAYATNGKGLIKVNGVPLEFIQPKNLKLKVYEPVLIVGKDVFSQVDIRVRVRGGGSVAQIYAIRQAIAKSI 93 The following BLAST results are available for this feature:
BLAST of CN188703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188703 ID=CN188703; Name=CN188703; organism=Citrus sinensis; type=EST; length=352bpback to top |