CN181596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_PIG (60S ribosomal protein L35 OS=Sus scrofa GN=RPL35 PE=2 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 4.504e-26 Identity = 55/88 (62.50%), Postives = 76/88 (86.36%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RK+A+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKFAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_OPHHA (60S ribosomal protein L35 OS=Ophiophagus hannah GN=RPL35 PE=2 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 5.883e-26 Identity = 56/88 (63.64%), Postives = 74/88 (84.09%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ LKT++++++E +P RKYA+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEEGLKTKKQQRKERLYPPRKYAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_HIPCM (60S ribosomal protein L35 OS=Hippocampus comes GN=rpl35 PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 3.813e-25 Identity = 53/88 (60.23%), Postives = 76/88 (86.36%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ SL+T++++++++ + +RK+A+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVITQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEESLRTKKQQRKDLLYSIRKFAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_XENTR (60S ribosomal protein L35 OS=Xenopus tropicalis GN=rpl35 PE=2 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 1.892e-24 Identity = 53/88 (60.23%), Postives = 73/88 (82.95%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ L+T+++++++ F RK+A+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEEGLRTKKQQRKDRLFSARKFAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_ICTPU (60S ribosomal protein L35 OS=Ictalurus punctatus GN=rpl35 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 4.216e-24 Identity = 54/88 (61.36%), Postives = 72/88 (81.82%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRP+KTRAIRR+LTKH+ L T++ ++R + MRK+A+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPRKTRAIRRQLTKHEQGLMTKKMQRRSRLYSMRKFAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_SCHPO (60S ribosomal protein L35 OS=Schizosaccharomyces pombe GN=rpl35 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.191e-24 Identity = 52/93 (55.91%), Postives = 72/93 (77.42%), Query Frame = -1 Query: 220 SFALLRVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 498 S + ++ GG+ +KLSKIK R +A++LTVI++ + A REAYKNKK++PLDLR KKTRAIRR LT ++ S KT ++ K+E YFP+RKYA+K Sbjct: 29 SLRVQKIAGGSGSKLSKIKTTRKDIARILTVINESNRLAAREAYKNKKYIPLDLRQKKTRAIRRALTPYEQSRKTLKQIKKERYFPLRKYALK 121
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_PLAFE (60S ribosomal protein L35 OS=Platichthys flesus GN=rpl35 PE=2 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 7.191e-24 Identity = 51/88 (57.95%), Postives = 75/88 (85.23%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KL+KI VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRP+KTRA+RRRL KH+ SL+T++++++++ + +RK+A+K Sbjct: 35 KVTGGAASKLTKICVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPRKTRALRRRLNKHEESLRTKKQQRKDLLYSIRKFAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_DANRE (60S ribosomal protein L35 OS=Danio rerio GN=rpl35 PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 9.392e-24 Identity = 53/88 (60.23%), Postives = 73/88 (82.95%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRAIRR+LTKH+ +L T++ +++ + +RK+A+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHEENLMTKKMQRKSRLYSIRKFAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_YEAST (60S ribosomal protein L35 OS=Saccharomyces cerevisiae GN=RPL35A PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-20 Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = -1 Query: 220 RPSFALLRVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 504 + A L+V + L KIK VR S+A VLTVI+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +AS TE+++K+++ FP RKYAIK Sbjct: 25 KKELAELKVQKLSRPSLPKIKTVRKSIACVLTVINEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYAIK 119 HSP 2 Score: 22.3274 bits (46), Expect = 1.670e-20 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = -2 Query: 501 KSKVDLLNQLKELKAELA 554 KSK L +QL +LK ELA Sbjct: 12 KSKEQLASQLVDLKKELA 29
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_WHEAT (60S ribosomal protein L35 OS=Triticum aestivum GN=RPL35 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 4.777e-20 Identity = 47/81 (58.02%), Postives = 63/81 (77.78%), Query Frame = -1 Query: 220 NKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 462 +KL++I +R S+A+VLTVI+ KQ+A LR YKNKK+ PLDLR K+TRAIRRRL+ + S E+ KKR ++FP RK+AIK Sbjct: 43 SKLNRIHDIRKSIARVLTVINAKQRAQLRLFYKNKKYAPLDLRAKQTRAIRRRLSPDEKSRVLEKTKKRTVHFPQRKFAIK 123 HSP 2 Score: 24.2534 bits (51), Expect = 4.777e-20 Identity = 12/17 (70.59%), Postives = 12/17 (70.59%), Query Frame = -2 Query: 504 KSKVDLLNQLKELKAEL 554 KSK DL QL ELK EL Sbjct: 14 KSKDDLTKQLAELKTEL 30 The following BLAST results are available for this feature:
BLAST of CN181596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181596 ID=CN181596; Name=CN181596; organism=Citrus sinensis; type=EST; length=555bpback to top |