CN181596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_EUPES (60S ribosomal protein L35 OS=Euphorbia esula GN=RPL35 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.930e-44 Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = -1 Query: 217 RPSFALLRV---TGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 504 + ALLRV TGGAPNKLSKIKVVRLS+AQVLTVISQKQK ALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ SLKTEREKK+EMYFPMRKYAIKV Sbjct: 25 KAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKKEMYFPMRKYAIKV 123 HSP 2 Score: 31.187 bits (69), Expect = 3.930e-44 Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = -2 Query: 501 KSKVDLLNQLKELKAELA 554 K+K +LLNQLK+LKAELA Sbjct: 12 KTKAELLNQLKDLKAELA 29
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL354_ARATH (60S ribosomal protein L35-4 OS=Arabidopsis thaliana GN=RPL35D PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 4.260e-43 Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = -1 Query: 217 RPSFALLRV---TGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 504 + ALLRV TGGAPNKLSKIKVVR S+AQVLTVISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK+EMYFP+RKYAIKV Sbjct: 25 KAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYAIKV 123 HSP 2 Score: 31.187 bits (69), Expect = 4.260e-43 Identity = 15/18 (83.33%), Postives = 15/18 (83.33%), Query Frame = -2 Query: 501 KSKVDLLNQLKELKAELA 554 KSK DL NQLKE KAELA Sbjct: 12 KSKTDLQNQLKEFKAELA 29
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL351_ARATH (60S ribosomal protein L35-1 OS=Arabidopsis thaliana GN=RPL35A PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.228e-42 Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = -1 Query: 217 RPSFALLRV---TGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 504 + ALLRV TGGAPNKLSKIKVVR S+AQVLTV SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK+EMYFP+RKYAIKV Sbjct: 25 KAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAIKV 123 HSP 2 Score: 31.9574 bits (71), Expect = 1.228e-42 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = -2 Query: 501 KSKVDLLNQLKELKAELA 554 KSK DL NQLKELKAELA Sbjct: 12 KSKSDLQNQLKELKAELA 29
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL352_ARATH (60S ribosomal protein L35-2 OS=Arabidopsis thaliana GN=RPL35B PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.086e-42 Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = -1 Query: 217 RPSFALLRV---TGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 504 + ALLRV TGGAPNKLSKIKVVR S+AQVLTVISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK+EMYFP+RKYAIKV Sbjct: 25 KAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAIKV 123 HSP 2 Score: 28.8758 bits (63), Expect = 2.086e-42 Identity = 14/18 (77.78%), Postives = 14/18 (77.78%), Query Frame = -2 Query: 501 KSKVDLLNQLKELKAELA 554 KSK DL QLKE KAELA Sbjct: 12 KSKADLSGQLKEFKAELA 29
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL353_ARATH (60S ribosomal protein L35-3 OS=Arabidopsis thaliana GN=RPL35C PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.021e-41 Identity = 81/94 (86.17%), Postives = 88/94 (93.62%), Query Frame = -1 Query: 217 SFALLRVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 498 S + +VTGGAPNKLSKIKVVR S+AQVLTV SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK++MYFP+RKYAIKV Sbjct: 30 SLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYAIKV 123 HSP 2 Score: 29.6462 bits (65), Expect = 1.021e-41 Identity = 15/18 (83.33%), Postives = 15/18 (83.33%), Query Frame = -2 Query: 501 KSKVDLLNQLKELKAELA 554 KSK DL QLKELKAELA Sbjct: 12 KSKSDLSTQLKELKAELA 29
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_RAT (60S ribosomal protein L35 OS=Rattus norvegicus GN=Rpl35 PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 5.321e-27 Identity = 57/88 (64.77%), Postives = 76/88 (86.36%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+ LKT++++++E +P+RKYA+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_MOUSE (60S ribosomal protein L35 OS=Mus musculus GN=Rpl35 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.321e-27 Identity = 57/88 (64.77%), Postives = 76/88 (86.36%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+ LKT++++++E +P+RKYA+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_HUMAN (60S ribosomal protein L35 OS=Homo sapiens GN=RPL35 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.548e-26 Identity = 56/88 (63.64%), Postives = 76/88 (86.36%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYA+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_CHICK (60S ribosomal protein L35 OS=Gallus gallus GN=RPL35 PE=2 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 1.548e-26 Identity = 57/88 (64.77%), Postives = 76/88 (86.36%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYAIK Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPVRKYAIK 122
BLAST of CN181596 vs. ExPASy Swiss-Prot
Match: RL35_BOVIN (60S ribosomal protein L35 OS=Bos taurus GN=RPL35 PE=2 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 1.548e-26 Identity = 56/88 (63.64%), Postives = 76/88 (86.36%), Query Frame = -1 Query: 220 RVTGGAPNKLSKIKVVRLSLAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 483 +VTGGA +KLSKI+VVR S+A+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYA+K Sbjct: 35 KVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVK 122 The following BLAST results are available for this feature:
BLAST of CN181596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181596 ID=CN181596; Name=CN181596; organism=Citrus sinensis; type=EST; length=555bpback to top |