CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_POLSJ (Malate dehydrogenase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=mdh PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 7.863e-29 Identity = 65/149 (43.62%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVP 448 P N I + AP +P K FT++ RLDHNRA QI+ K V+D++ + +WGNHS + Y D AT+N GE V +++ D W F+ TV +RGAAII+AR DH+RDW LGT G WV+MG+ SDG Y +P Sbjct: 135 PANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKAVADIEKLTVWGNHSPTMYADYRFATIN---GES-VAKMINDQEWNANVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGQYGIP 278
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_LARHH (Malate dehydrogenase OS=Laribacter hongkongensis (strain HLHK9) GN=mdh PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 7.863e-29 Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 2 Query: 62 FTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGL 457 +T++ RLDHNRAL Q++ K V+ ++N+ +WGNHS + Y D ATVN GE V+ ++ D+AW F+ TV +RGAAII+AR DHIRDWVLGT G WV+MG+ SDGSY +P G+ Sbjct: 155 YTAMLRLDHNRALSQLAAKTGKAVASIENMAVWGNHSPTMYADYRFATVN---GES-VKSMINDEAWNRDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGIPSDGSYGIPEGV 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_VARPS (Malate dehydrogenase OS=Variovorax paradoxus (strain S110) GN=mdh PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.027e-28 Identity = 64/149 (42.95%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVP 448 P N I + AP +P K FT++ RLDHNRA QI+ K V+D++ +++WGNHS + Y D AT+ GE V +++ D W F+ TV +RGAAII+AR DH+RDW LGT G WV+MG+ SDG Y +P Sbjct: 135 PANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKAVADIEKLVVWGNHSPTMYADYRFATIK---GES-VAKMINDQEWNANTFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGQYGIP 278
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CORDI (Malate dehydrogenase OS=Corynebacterium diphtheriae GN=mdh PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.027e-28 Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + A IPA F ++ RLDHNR + Q+SEKL +D++ ++WGNHS+ Q+PD+ +AT+ G + + LV D W GEFI V +RGA II+ R DH+ DW+ GT +G W + + SDGSY VP GLI Sbjct: 133 PANTNALIAQHAAKDIPADRFNAMMRLDHNRGIAQLSEKLGRDKNDIEKFVVWGNHSAGQFPDITYATI----GGEAISGLVDHD-WYTGEFIPRVAKRGAEIIEVRGKSSAASAASSAIDHMHDWINGT-DGQWRTAAIPSDGSYGVPEGLI 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_BDEBA (Malate dehydrogenase OS=Bdellovibrio bacteriovorus GN=mdh PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.027e-28 Identity = 69/143 (48.25%), Postives = 87/143 (60.84%), Query Frame = 2 Query: 47 IPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK-----DDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 + AK FT++ RLDHNRAL Q++ K V+ K V +WGNHS + YPDV AT + A V EL+K DAW FI TV +RGAAII+AR DHIRDW LGT G WV+MG+ SDGSY++P G++ Sbjct: 152 VKAKNFTAMLRLDHNRALSQLATKTGKPVASFKKVAVWGNHSPTMYPDVRFATADGA----KVPELLKLGTAEGDAWNKDTFIPTVGKRGAAIIEARGLSSAASAASAAVDHIRDWWLGT-NGEWVTMGIPSDGSYDIPEGIM 289
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_RALEJ (Malate dehydrogenase OS=Ralstonia eutropha (strain JMP134) GN=mdh PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.341e-28 Identity = 64/150 (42.67%), Postives = 90/150 (60.00%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPA 451 P N I + APS+P + FT++ RLDHNRAL QI+ K V+ ++ + +WGNHS + Y D +ATV+ K V++++ D W N F+ TV +RGAAII+AR DH+ DWVLGT G V+MG+ S+G Y +PA Sbjct: 133 PANTNAYIAMKSAPSLPRENFTAMLRLDHNRALSQIAAKTGKPVASIEKMFVWGNHSPTMYADYRYATVD----GKSVKDMINDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVHDWVLGT-NGKVVTMGIPSNGEYGIPA 277
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_XANOP (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=mdh PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.752e-28 Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + FT++ RLDHNRAL Q++ KL V ++ +++WGNHS + YPD AT + A+ + + + D W FI TV +RGAAII+AR DH+RDWVLG+ G WV+MGV SDGSY + G+I Sbjct: 134 PANTNAYIAMKSAPDLNPNNFTAMLRLDHNRALSQLALKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS----IGDAINDQEWNASTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGISEGVI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_RALPJ (Malate dehydrogenase OS=Ralstonia pickettii (strain 12J) GN=mdh PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.752e-28 Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVP 448 P N I + AP +P + FT++ RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +AT++ K V++++ D W N F+ TV +RGAAII+AR DH+RDWVLGT G V+MG+ S+G Y +P Sbjct: 135 PANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYATID----GKSVKDMINDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKIVTMGIPSNGEYGIP 278
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CUPTR (Malate dehydrogenase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=mdh PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.752e-28 Identity = 64/150 (42.67%), Postives = 91/150 (60.67%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPA 451 P N I + AP++P + FT++ RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +ATV+ + V++L+ D W N F+ TV +RGAAII+AR DH+RDWVLG+ G V+MG+ S+G Y +PA Sbjct: 133 PANTNAYIAMKSAPNLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYATVD----GQSVKDLINDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKVVTMGIPSNGEYGIPA 277
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ACICJ (Malate dehydrogenase OS=Acidiphilium cryptum (strain JF-5) GN=mdh PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.752e-28 Identity = 63/153 (41.18%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + F+++ RLDHNRA ++ K V V DV +I+WGNHS + YPD A AG + + E + D+AW FI TV +RGAA+I+AR D +RDWV+G+ +G WVSM + SDGSY +P G++ Sbjct: 133 PANTNAYIAMKSAPDLSPDCFSAMIRLDHNRAASMLAAKAGVNVGDVGKLIVWGNHSPTMYPDYRFA----EAGGRKLAEAINDEAWNRDVFIPTVGKRGAAVIEARGASSAASAANAAIDQVRDWVVGS-DGRWVSMAIPSDGSYGIPEGIM 280 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |