CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_LEPBP (Malate dehydrogenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=mdh PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.255e-26 Identity = 65/153 (42.48%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI A +P+ + ++T LD NRA Q+++K V V DV NV IWGNHS++QYPD +A VN KP +++ D WL G+FI+TVQ+RGAAII AR D + + V T G W S +S+G Y V GLI Sbjct: 132 PCNTNALIAMNNAKGVPSDRWFAMTGLDENRAKTQLAQKAGVLVKDVSNVAIWGNHSATQYPDFFNAKVN----GKPATDVISDHDWLKGDFISTVQKRGAAIIAARGASSAASAANAVVDTVHNIVTPTKPGDWFSAACHSNGEYGVDKGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_LEPBA (Malate dehydrogenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=mdh PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.255e-26 Identity = 65/153 (42.48%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI A +P+ + ++T LD NRA Q+++K V V DV NV IWGNHS++QYPD +A VN KP +++ D WL G+FI+TVQ+RGAAII AR D + + V T G W S +S+G Y V GLI Sbjct: 132 PCNTNALIAMNNAKGVPSDRWFAMTGLDENRAKTQLAQKAGVLVKDVSNVAIWGNHSATQYPDFFNAKVN----GKPATDVISDHDWLKGDFISTVQKRGAAIIAARGASSAASAANAVVDTVHNIVTPTKPGDWFSAACHSNGEYGVDKGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CORGL (Malate dehydrogenase OS=Corynebacterium glutamicum GN=mdh PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.640e-26 Identity = 64/152 (42.11%), Postives = 87/152 (57.24%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGL 457 P N LI AP +PA F ++ RLDHNRA+ Q++ KL ++ N+++WGNHS++Q+PD+ +ATV GEK V +LV D W EFI V RGA II+ R DH+RDWV GT W S + S G+Y +P G+ Sbjct: 137 PANTNALIASAAAPDVPASRFNAMMRLDHNRAISQLATKLGRGSAEFNNIVVWGNHSATQFPDITYATV---GGEK-VTDLVDHD-WYVEEFIPRVANRGAEIIEVRGKSSAASAASSAIDHMRDWVQGTE--AWSSAAIPSTGAYGIPEGI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CORGB (Malate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=mdh PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.640e-26 Identity = 64/152 (42.11%), Postives = 87/152 (57.24%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGL 457 P N LI AP +PA F ++ RLDHNRA+ Q++ KL ++ N+++WGNHS++Q+PD+ +ATV GEK V +LV D W EFI V RGA II+ R DH+RDWV GT W S + S G+Y +P G+ Sbjct: 137 PANTNALIASAAAPDVPASRFNAMMRLDHNRAISQLATKLGRGSAEFNNIVVWGNHSATQFPDITYATV---GGEK-VTDLVDHD-WYVEEFIPRVANRGAEIIEVRGKSSAASAASSAIDHMRDWVQGTE--AWSSAAIPSTGAYGIPEGI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_PARUW (Malate dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=mdh PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.063e-25 Identity = 66/154 (42.86%), Postives = 86/154 (55.84%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLI 460 P N LI APS+ + F ++TRLD NRA +S+K V DV V IWGNHS++Q PD VN +KPV ++ D WL +FI +VQ+RGAAII+AR D +RD +L TP G W S + SDG+ Y + GLI Sbjct: 132 PCNTNCLIALNNAPSLKRENFYAMTRLDQNRATFFLSQKSQVSTKDVSCVTIWGNHSATQVPDF----VNAKISQKPVETIIPDRQWLEKDFIESVQKRGAAIIQARGKSSAASAASALLDAMRDRILPTPTGQWFSTALLSDGNPYGIEEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_AZOSE (Malate dehydrogenase OS=Azoarcus sp. (strain EbN1) GN=mdh PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.388e-25 Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 2 Query: 62 FTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 + + RLDHNRAL Q++ K VS +K +++WGNHS + Y D T N + V+ LV D AW N F+ TV +RGAAII AR DH+ DW LG+ + WV+MGV SDGSY +PAG++ Sbjct: 156 YHGMLRLDHNRALSQLAAKTGRPVSSLKKMVVWGNHSPTMYADYRFCTSNGDS----VKALVNDHAWNNDVFLPTVGKRGAAIIDARGLSSAASAANAAIDHMHDWALGSDD--WVTMGVPSDGSYGIPAGVV 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MAGSM (Malate dehydrogenase OS=Magnetococcus sp. (strain MC-1) GN=mdh PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25 Identity = 60/138 (43.48%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 47 IPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 +P + F+++ RLD NRA ++ K QV DV NV+IWGNHS++Q PD A + G KPV E++ D AWL F+ TVQ RGAA+IKAR DH+R + TP G V ++G+Y V AGLI Sbjct: 145 VPHERFSAMMRLDQNRAKYLLASKAGAQVIDVTNVVIWGNHSNNQVPDFEFAKI----GGKPVPEVIADAAWLENAFMPTVQNRGAAVIKARGASSAASAANAALDHVRSLITPTPAGDTFCAAVMANGAYGVDAGLI 278
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHP1_SORBI (Malate dehydrogenase [NADP] 1, chloroplastic OS=Sorghum bicolor PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25 Identity = 64/145 (44.14%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS 436 P N LI + AP IPAK F +LTRLD NRA Q++ K V V NV IWGNHS++Q PD +A ++ +PV+E++KD WL EF TVQ+RG A+I+ D I+ V TPEG W S GVY+ G+ Sbjct: 214 PCNTNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKID----GRPVKEVIKDTKWLEEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGN 354
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHP_MAIZE (Malate dehydrogenase [NADP], chloroplastic OS=Zea mays PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.368e-25 Identity = 64/145 (44.14%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS 436 P N LI + AP+IPAK F +LTRLD NRA Q++ K V V NV IWGNHS++Q PD +A ++ +PV+E++KD WL EF TVQ+RG +I+ D IR V TPEG W S GVY+ G+ Sbjct: 217 PCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKID----GRPVKEVIKDTKWLEEEFTLTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSTGVYTTGN 357
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH1_BURVG (Malate dehydrogenase 1 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.368e-25 Identity = 56/153 (36.60%), Postives = 84/153 (54.90%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N + + +AP +PA T++ RLDHNRA+ +++ + V V V + +WGNHS + +PD HA ++ ++P V D+ W FI V +RG AII+AR D +RDW+ G+ G WVSM + S G Y +P GL+ Sbjct: 133 PANTNAWVARHYAPDLPADAITAMIRLDHNRAVSKLAARCGVTVDAVSRMAVWGNHSPTMFPDYRHALID----QQPAPMRVGDERWYLDTFIPEVARRGTAIIEARGASSAASAANAAIDQMRDWIRGS-GGRWVSMSIVSGGEYGIPRGLM 280 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |