CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_NITEC (Malate dehydrogenase OS=Nitrosomonas eutropha (strain C91) GN=mdh PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.025e-36 Identity = 71/153 (46.41%), Postives = 99/153 (64.71%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP +PA+ F+ + RLDHNRAL Q++ KLN VS++K +I+WGNHSS+Q+PD+ HA + G+ V L+KD W+ FI TVQ+RGA +I+AR DH+R+W GT +G W +MG+ SDGSY +P G+I Sbjct: 132 PANTNTLITMKNAPDLPAENFSGMLRLDHNRALSQVAMKLNQPVSNIKKMIVWGNHSSTQFPDLYHAEI----GDTKVINLIKDPIWIENYFIPTVQKRGAVVIEARGLSSAASAANAIIDHLRNWFFGTADGDWTTMGILSDGSYEIPEGVI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.748e-36 Identity = 77/153 (50.33%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP + F++LTRLDHNRA+ Q+++K +V+D+K + IWGNHS++QYPD+ HA V K E+V D W+ +FI TV +RGAAII AR D RDW+LGTP G WVSM V SDGSY VP GLI Sbjct: 133 PANTNALIAMSNAPDIPRERFSALTRLDHNRAISQLAKKTGAKVTDIKKMTIWGNHSATQYPDIFHAEVK----GKNAAEVVGDQNWIENDFIPTVAKRGAAIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.283e-36 Identity = 74/153 (48.37%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP + + FT++TRLDHNRAL Q+S K+ ++++ + +WGNHS++QYPD++H T+ +P + V + AW+ FI TVQQRGAAIIKAR DH+RDW LGTPEG W SM V SDGSY + AGLI Sbjct: 132 PANTNALITQRNAPDLDPRNFTAMTRLDHNRALAQLSNKVGCHSTEIRGLAVWGNHSATQYPDISHCTIQG----RPAADQV-EHAWVKDTFIPTVQQRGAAIIKARGASSAASAASAAIDHMRDWALGTPEGEWTSMAVPSDGSYGIEAGLI 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.283e-36 Identity = 77/153 (50.33%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP I + FT++TRLDHNRAL Q++ K ++++ +IWGNHSS+QYPD++ NT KP LV D AW ++I TVQQRGAAII AR +HIRDW LGTP WVSMGVYSDGSY + GLI Sbjct: 132 PANTNALIAQRNAPDISPRQFTAMTRLDHNRALSQLATKTGTSINNITKALIWGNHSSTQYPDLH----NTLVDGKPALSLV-DQAWYESDYIPTVQQRGAAIIAARGASSAASAANAAINHIRDWALGTPANDWVSMGVYSDGSYGIEKGLI 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCTU (Malate dehydrogenase OS=Mycobacterium tuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.894e-36 Identity = 80/153 (52.29%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP + F++LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V AG K E+V D AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI Sbjct: 133 PANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV---AG-KNAAEVVNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCTA (Malate dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mdh PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.894e-36 Identity = 80/153 (52.29%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP + F++LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V AG K E+V D AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI Sbjct: 133 PANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV---AG-KNAAEVVNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCBT (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=mdh PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.894e-36 Identity = 80/153 (52.29%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP + F++LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V AG K E+V D AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI Sbjct: 133 PANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV---AG-KNAAEVVNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCBP (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=mdh PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.894e-36 Identity = 80/153 (52.29%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP + F++LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V AG K E+V D AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI Sbjct: 133 PANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV---AG-KNAAEVVNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_MYCBO (Malate dehydrogenase OS=Mycobacterium bovis GN=mdh PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.894e-36 Identity = 80/153 (52.29%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP + F++LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V AG K E+V D AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI Sbjct: 133 PANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV---AG-KNAAEVVNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 6.641e-36 Identity = 77/153 (50.33%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP I + FT++ RLDHNR L Q++ KL+V + D+ + IWGNHS++QYPD+ H V G+ V ++ KD W +FI TVQQRGAAIIKAR H+RDW LGTPE WVSMGVYSDGSY + GLI Sbjct: 132 PANTNALIAQRNAPDINPRQFTAMMRLDHNRGLSQLAAKLDVTLEDITKMTIWGNHSATQYPDLFHTLVK---GDVAVEQVEKD--WYENDFIPTVQQRGAAIIKARGASSAASAANAAIFHMRDWALGTPENDWVSMGVYSDGSYGIEEGLI 279 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |