CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_BORA1 (Malate dehydrogenase OS=Bordetella avium (strain 197N) GN=mdh PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.385e-33 Identity = 71/153 (46.41%), Postives = 97/153 (63.40%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL Q++ K V+ ++ +I+WGNHS + YPD ATV+ +P+ +L+ D+AW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+I Sbjct: 135 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLAGKSGKAVAGIEKLIVWGNHSPTMYPDYRFATVD----GQPLAKLINDEAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGII 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_POLNS (Malate dehydrogenase OS=Polynucleobacter necessarius (strain STIR1) GN=mdh PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.809e-33 Identity = 72/153 (47.06%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP IPAK FT++ RLDHNRAL Q++ KLN V+D++ +++WGNHS + YPD AT++ K V++ + D AW FI TV +RGAAII+AR DHI DWVLGT G WV+MG+ S G Y++PA +I Sbjct: 135 PANTNAYIAMKSAPDIPAKNFTAMLRLDHNRALSQLANKLNKPVADIEKLVVWGNHSPTMYPDYRFATID----GKSVKDSINDAAWNKDVFIPTVGKRGAAIIEARGLSSAASAANAAIDHIHDWVLGT-NGKWVTMGIPSKGEYDIPAEVI 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_POLSQ (Malate dehydrogenase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=mdh PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.362e-33 Identity = 72/153 (47.06%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP IPAK FT++ RLDHNRAL Q++ KLN V+D++ +++WGNHS + YPD AT++ K V++ + D AW FI TV +RGAAII+AR DHI DWVLGT G WV+MG+ S G Y +PA +I Sbjct: 135 PANTNAYIAMKSAPDIPAKNFTAMLRLDHNRALSQLANKLNKPVADIEKLVVWGNHSPTMYPDYRFATID----GKSVKDSINDAAWNKDVFIPTVGKRGAAIIEARGLSSAASAANAAIDHIHDWVLGT-NGKWVTMGIPSKGEYGIPAEVI 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_CORJK (Malate dehydrogenase OS=Corynebacterium jeikeium (strain K411) GN=mdh PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.362e-33 Identity = 73/153 (47.71%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I+ A + + T+LTRLDHNR L Q+++KL V V D+KN+ +WGNHS+SQ+PDV T+N GEK +L D AW+N EFI V +RGA II+ R DH+RDWV GT EG WVS+ + SDGSY +P GL+ Sbjct: 135 PANTNAAIVAAHAEGLDPRRVTALTRLDHNRGLAQVADKLGVAVRDLKNMTVWGNHSASQFPDVAELTLN---GEKVADKL--DAAWVNDEFIPRVAKRGAEIIEVRGRSSAASAASAALDHMRDWVNGTAEGDWVSVALPSDGSYGIPEGLV 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_NITMU (Malate dehydrogenase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=mdh PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.873e-33 Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + APS+ F+S+ RLDHNRA+ Q++ K+ VS V+ +I+WGNHSS+QYPD++HA V+ +LV D AW+ FI +Q+RG +I+AR H+RDWV GTPEG WVSMG+ SDGSY +P G+I Sbjct: 132 PANTNAYITMKNAPSLKPTSFSSMMRLDHNRAVFQLAVKVGQPVSSVRKMIVWGNHSSAQYPDLSHAEVD----GHNAADLVNDMAWIETGFIPVIQKRGMEVIEARGSSSAASAANAAICHMRDWVSGTPEGDWVSMGIPSDGSYGIPEGVI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_AQUAR (Malate dehydrogenase OS=Aquaspirillum arcticum GN=mdh PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 1.172e-32 Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + APS+PAK FT++ RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +A ++ A+ V++++ DDAW F+ TV +RGAAII AR DHI DWVLGT G W +MG+ SDGSY +P G+I Sbjct: 135 PANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGAS----VKDMINDDAWNRDTFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGT-AGKWTTMGIPSDGSYGIPEGVI 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_PROAC (Malate dehydrogenase OS=Propionibacterium acnes GN=mdh PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.531e-32 Identity = 76/153 (49.67%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI A IP F +LTRLDHNRA Q++ K V+DV+++ IWGNHSS+QYPDV HA V AG+K + ++AW+ EFI TV +RGAAII AR + +RDW+ TPEG WVSM + SDGSY VP GLI Sbjct: 132 PANTNALIAATNAVDIPNNHFAALTRLDHNRAKTQLARKTGKTVNDVRHMTIWGNHSSTQYPDVFHAEV---AGQKATN--LVNEAWIENEFIPTVAKRGAAIIDARGASSAASAANATVECMRDWMGSTPEGDWVSMAIPSDGSYGVPEGLI 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_XYLFM (Malate dehydrogenase OS=Xylella fastidiosa (strain M12) GN=mdh PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.612e-32 Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + K FT++ RLDHNRAL Q+S KL+ V++++ +I+WGNHS + YPD AT A P+ E + D AW FI TV +RGAAII+AR DH+RDW+LG+ G W++MGV SDGSY +P G+I Sbjct: 134 PANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLSKPVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQAWNANSFIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_JANMA (Malate dehydrogenase OS=Janthinobacterium sp. (strain Marseille) GN=mdh PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.612e-32 Identity = 70/153 (45.75%), Postives = 93/153 (60.78%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP++PAK FT++ RLDHNRAL QI+ K++ V+ ++ + +WGNHS + YPD AT A K V+E + D+ W F+ TV +RGAAII AR DH+RDWVLGT G WV+MG+ SDGSY +P I Sbjct: 135 PANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKISKPVTSIEKLTVWGNHSPTMYPDYRFAT----ADGKSVKEAINDEVWNKDVFLPTVGKRGAAIIDARGVSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPKDTI 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_XYLFT (Malate dehydrogenase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mdh PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.411e-32 Identity = 70/153 (45.75%), Postives = 93/153 (60.78%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP + K FT++ RLDHNRAL Q+S KL V++++ +I+WGNHS + YPD AT A P+ E + D AW FI TV +RGAAII+AR DH+RDW+LG+ G W++MGV SDGSY +P G+I Sbjct: 134 PANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLGKPVANIEKLIVWGNHSPTMYPDYRFAT----ADGTPIIEAINDQAWNANSFIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMI 281 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |