CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH1_BURTA (Malate dehydrogenase 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 9.924e-32 Identity = 71/153 (46.41%), Postives = 93/153 (60.78%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +P K FT++ RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD A TA GE + +L+ DDAW FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +I Sbjct: 133 PANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDII 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_THETH (Malate dehydrogenase OS=Thermus thermophilus GN=mdh PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.296e-31 Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP + + FT++TRLDHNRA Q+++K V ++ + +WGNHSS+ +PD+ HA V+ +P ELV D W FI TV QRGAAII+AR +HIRDW LGTPEG WVSM V S G Y +P G++ Sbjct: 132 PANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIV 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_THET8 (Malate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=mdh PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.296e-31 Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP + + FT++TRLDHNRA Q+++K V ++ + +WGNHSS+ +PD+ HA V+ +P ELV D W FI TV QRGAAII+AR +HIRDW LGTPEG WVSM V S G Y +P G++ Sbjct: 132 PANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIV 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_THET2 (Malate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mdh PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.296e-31 Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI + AP + + FT++TRLDHNRA Q+++K V ++ + +WGNHSS+ +PD+ HA V+ +P ELV D W FI TV QRGAAII+AR +HIRDW LGTPEG WVSM V S G Y +P G++ Sbjct: 132 PANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIV 279
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_ACIAD (Malate dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=mdh PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.296e-31 Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +PAK FT++ RLDHNRAL QI++K V V+D++ + +WGNHS + Y D AT N GE +++ + D W F+ TV +RGAAII+AR DH+RDW LGT G WV+MG+ SDGSY +P G+I Sbjct: 134 PANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQIAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN---GEN-LKDKINDAEWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGSYGIPEGVI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_XANCB (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=mdh PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.693e-31 Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I E AP + K FT++ RLDHNRAL Q+S KL V ++ +++WGNHS + YPD AT + A+ + + + D W G FI TV +RGAAII+AR DH+RDWVLG+ G WV+MGV SDGSY +P G+I Sbjct: 134 PANTNAYIAMESAPDLNPKNFTAMLRLDHNRALSQLSLKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS----IGDAINDQEWNAGTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGIPEGVI 281
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH2_BURVG (Malate dehydrogenase 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh2 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.693e-31 Identity = 71/153 (46.41%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +P K FT++ RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD A TA GE ++ LV DD W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +I Sbjct: 133 PANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKTGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGESMLK-LVNDDVWNRETFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDII 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDHB_DICDI (Probable malate dehydrogenase 2, mitochondrial OS=Dictyostelium discoideum GN=mdhB PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.211e-31 Identity = 68/152 (44.74%), Postives = 88/152 (57.89%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGL 457 P N LI AP+I K F+++TRLDHNR L Q+++K V+D++ IWGNHS++QYPD+N TV K + + + D W+ FI TVQQRGAAII AR DH+RDW GT G W SM +YS+G Y GL Sbjct: 153 PANTNALIAARNAPNIDPKRFSAMTRLDHNRGLAQLADKTGSAVTDIEKFCIWGNHSATQYPDINFGTVK----GKSLVDTINDQKWVKDNFIPTVQQRGAAIIAARGLSSAASAASAAIDHMRDWTYGT-NGQWTSMAIYSEGEYGADKGL 299
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_BURS3 (Malate dehydrogenase OS=Burkholderia sp. (strain 383) GN=mdh PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.888e-31 Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +P K FT++ RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD A TA GE + +L+ DD W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +I Sbjct: 133 PANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDII 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_BURPS (Malate dehydrogenase OS=Burkholderia pseudomallei GN=mdh PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 2.888e-31 Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N I + AP +P K FT++ RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD A TA GE + +L+ DD W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +I Sbjct: 133 PANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDII 280 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |