EY666016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: PILB_PSEAE (Type 4 fimbrial assembly protein pilB OS=Pseudomonas aeruginosa GN=pilB PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.424e-16 Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKRPNG-------------------QVYQAVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVT 382 LHTN A ++RL +G+P + + ++ ++AQRL R LC HCK+ + ++Y VGC C+ +GY+GR GIYE++ L+ ++ + + A +G LR++G K M G+T+LEEV RVT Sbjct: 420 LHTNSAAETLTRLLNMGVPAFNLATSVNLIIAQRLARKLCSHCKKEHEVPRETLLHEGFPEDKIGTFKLYSPVGCDHCK-NGYKGRVGIYEVVKNTPALQRIIMEEGNSIEIAEQARKEGFNDLRTSGLLKAMQGITSLEEVNRVT 564
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: GSPE_XANCP (General secretion pathway protein E OS=Xanthomonas campestris pv. campestris GN=xpsE PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 5.065e-14 Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLL-CPHCKR-----------------PNGQVY-QAVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVT 382 LHTN+A G I+RL ++G+ YL+ +T+ G++AQRLVR L + +R P+G+++ +GY GR I E ++MND L+ V + + A GM ++ G K + G TT+EEVLRVT Sbjct: 419 LHTNNAAGGITRLLDMGVEDYLLTSTINGILAQRLVRKLDLANAERYAASPEEIERFDLRRLQPDGEIFLYRPRATAAAPTGYLGRTTIVEFLVMNDELRRAVMRRAGMGEIEQLARKSGMRTMYEDGLSKALRGETTIEEVLRVT 564
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: HOFB_HAEIN (Protein transport protein hofB homolog OS=Haemophilus influenzae GN=hofB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12 Identity = 52/128 (40.62%), Postives = 67/128 (52.34%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKRPNGQVYQAVGCGDCRESGYRGRAGIYEIM--LMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRV 379 LHTNDA AISRLQ+LGI Y I +LL V+AQRLVR LC C G + + C GYRGR G+Y+ + ND TD + +LR++G KV G+T +E+ RV Sbjct: 358 LHTNDAISAISRLQQLGIQQYEIKNSLLLVIAQRLVRKLCSKC---GGNLANSCDC----HQGYRGRIGVYQFLHWQQNDY-------QTDFK------------NLRASGLEKVSQGITDEKEIERV 459 The following BLAST results are available for this feature:
BLAST of EY666016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666016 ID=EY666016; Name=EY666016; organism=Citrus sinensis; type=EST; length=855bpback to top |