EY666016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: GSPE_PSEAE (General secretion pathway protein E OS=Pseudomonas aeruginosa GN=xcpR PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.518e-26 Identity = 63/145 (43.45%), Postives = 95/145 (65.52%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKRP-----------------NGQVYQAVGCGDCRESGYRGRAGIYEIMLMNDRLKALV-TPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVT 382 LHTN A GAI+RL ++GI +L+++++LGV+AQRLVR+LCP CK P +++A GCG+C + GYRGR GIYE+++ +D +++L+ ++ ++ RHA S+R G RKV+ G+TT+EEVLRVT Sbjct: 357 LHTNSAIGAITRLVDMGIEPFLLSSSMLGVLAQRLVRVLCPACKEPYRADEAECALLGVDPAAPPTLHRARGCGECHQHGYRGRTGIYELVVFDDHMRSLIHNESSEQEMTRHARTSGP--SIRDDGRRKVLEGVTTVEEVLRVT 499
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: GSPE_KLEPN (General secretion pathway protein E OS=Klebsiella pneumoniae GN=pulE PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25 Identity = 61/142 (42.96%), Postives = 90/142 (63.38%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKR---------------PNGQVYQAVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVT 382 LHTN A GAISRLQ++G+ +L++ +LL VM+QRLVR LCPHC++ P ++Q GC +C +GYRGR GI+E++L++DR++ + G + +V L +LR AG K +AG+T+ +EVLRVT Sbjct: 349 LHTNSALGAISRLQDMGVEPFLLSTSLLAVMSQRLVRRLCPHCRQQEPANADTAHQMEIAPGTALWQPRGCAECGFTGYRGRTGIHELLLVDDRVRMAIHRGEN-EVTLIQQLGTDYMTLRRAGREKALAGITSWQEVLRVT 489
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: GSPE1_ERWCH (General secretion pathway protein E OS=Erwinia chrysanthemi GN=outE PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.421e-24 Identity = 63/143 (44.06%), Postives = 90/143 (62.94%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKRP---------------NGQVYQAVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPG-TDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVT 382 LHTN A GA+SRLQ++GI +L++ +LLGV+AQRLVR LCP C++P +Y GC C SGYRGR GI+E++L++D ++A + G ++L + R L ++R G KV+AG+TT EEV+RVT Sbjct: 355 LHTNSALGALSRLQDMGIEPFLLSTSLLGVLAQRLVRTLCPSCRQPYTIDHEQAEQTGLAAGTTLYHPGGCEKCNYSGYRGRTGIHELLLIDDTVRAAIHRGESELGIAR--MLGAKRVTIRQDGLDKVLAGITTWEEVVRVT 495
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: GSPE_VIBCH (General secretion pathway protein E OS=Vibrio cholerae GN=epsE PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.203e-23 Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKRPNGQ-----------------VYQAVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVT 382 LHTN A GA++RL+++GI +LI+++LLGV+AQRLVR LCP CK P +Y+A GC C GYRGR GI+E++L++D L+ L+ Q + + S+R G KV G+T+LEEV+RVT Sbjct: 358 LHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAM-EKHIRATTPSIRDDGLDKVRQGITSLEEVMRVT 500
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: GSPE_PECCC (General secretion pathway protein E OS=Pectobacterium carotovorum subsp. carotovorum GN=outE PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.499e-23 Identity = 60/142 (42.25%), Postives = 87/142 (61.27%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKR---------------PNGQVYQAVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVT 382 LHTN A GA+SRLQ++G+ +L++ +LLGV+AQRLVR LC C + P ++ VGC C +GYRGR GI+E++L+ND ++A + +D ++ L ++R G KV+AGLTT EEV+RVT Sbjct: 355 LHTNSALGALSRLQDMGVEPFLLSTSLLGVLAQRLVRTLCSDCSQPQPVDPVQAEQMGIAPGTLLHNPVGCPQCSFTGYRGRIGIHELVLINDDVRAAI-HRSDGEMAIAQILGGSRTTIRQDGLNKVLAGLTTWEEVIRVT 495
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: GSPE_AERHY (General secretion pathway protein E OS=Aeromonas hydrophila GN=exeE PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.600e-22 Identity = 57/147 (38.78%), Postives = 88/147 (59.86%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCK-----------------RPNGQVYQAVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVTPGD 391 LHTN A GAI+R++++GI +L++++LL V+AQRLVR LCP C+ P+ QV++ VGC C +GYRGR GI+E++++++ ++ + + + D S+R G KV+ G T+LEEVLRVT D Sbjct: 356 LHTNTAIGAITRMRDMGIEPFLLSSSLLAVLAQRLVRTLCPDCRAPRPITEQERLAMGMELAPDQQVWRPVGCEQCNHTGYRGRTGIHELVVIDEAVREAIHSASGELAIERLIRDH-TPSIRRDGIDKVLKGQTSLEEVLRVTRED 501
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: PILF_NEIGO (Type IV pilus assembly protein pilF OS=Neisseria gonorrhoeae GN=pilF PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20 Identity = 56/145 (38.62%), Postives = 87/145 (60.00%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCK----RPNG-----------------QVYQAVGCGDCRESGYRGRAGIYEIMLMNDRL-KALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEV 370 LHTN+AP +SR+ +G+ + I +++ +MAQRL+R LC CK RP+ ++Y AVGC CR GY+GRAG+YE+M +++ + + ++ GT++ +L A +GM LR AG K+M G+T+LEEV Sbjct: 409 LHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSSCKQEVERPSASALKEVGFTDEDLAKDWKLYGAVGCDRCRGQGYKGRAGVYEVMPISEEMQRVIMNNGTEVGIL-DVAYKEGMVDLRRAGILKIMQGITSLEEV 552
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: TAPB_AERHY (Type IV pilus assembly protein tapB OS=Aeromonas hydrophila GN=tapB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.773e-20 Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKRPNG--------------------QVYQAVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVT 382 LHTN A ++R+ +G+P + I +++ +MAQRL R LC HCK P ++++ VGC DC GY+GR GIYEIMLM++ + L+ G + + A +GM +LR +G K G+T+L E+ RVT Sbjct: 421 LHTNSAAETLTRMMNMGVPAFNIASSVTLIMAQRLARKLCDHCKAPEVVPEAELLELGFTQQQLAAGLRLFKPVGCKDC-SGGYKGRVGIYEIMLMSENIAKLIMQGANSLQIAAIAQKEGMRTLRISGLEKARIGVTSLAEINRVT 566
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: GSPE_ECOLI (Probable general secretion pathway protein E OS=Escherichia coli (strain K12) GN=gspE PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.177e-20 Identity = 52/150 (34.67%), Postives = 88/150 (58.67%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKR------PNGQVYQ-----------AVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRVTPGDSET 400 LHTN A GA++RL+++G+ +L++++L G++AQRLVR LCP C++ Q+++ VGC C +SGY+GR I+E+M++ L+A + D Q L Q +++ G +KV++G T+ +EV+RV E+ Sbjct: 343 LHTNSASGAVTRLRDMGVESFLLSSSLAGIIAQRLVRRLCPQCRQFTPVSPQQAQMFKYHQLAVTTIGTPVGCPHCHQSGYQGRMAIHEMMVVTPELRAAIHENVDEQALERLVRQQHKALIKN-GLQKVISGDTSWDEVMRVASATLES 491
BLAST of EY666016 vs. ExPASy Swiss-Prot
Match: HOFB_ECOLI (Protein transport protein hofB OS=Escherichia coli (strain K12) GN=hofB PE=3 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 1.288e-17 Identity = 50/140 (35.71%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 2 LHTNDAPGAISRLQELGIPHYLINATLLGVMAQRLVRLLCPHCKRPNGQV--------------YQAVGCGDCRESGYRGRAGIYEIMLMNDRLKALVTPGTDLQVLRHAALDQGMCSLRSAGTRKVMAGLTTLEEVLRV 379 LHTN + RLQ++G+ +++++ L V+AQRLVR LCPHC+R G+ +QA GC C G+ GR ++E++ + ++ L++ TD++ L A GM +L G V GLTT EE++RV Sbjct: 316 LHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYH-GFYGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEELIRV 454 The following BLAST results are available for this feature:
BLAST of EY666016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666016 ID=EY666016; Name=EY666016; organism=Citrus sinensis; type=EST; length=855bpback to top |