CN188190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_TRYCO (V-type proton ATPase subunit B OS=Trypanosoma congolense PE=2 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 1.882e-107 Identity = 193/246 (78.46%), Postives = 215/246 (87.40%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DMLGR+FNGSG PID+GPP+L E Y DI G INP R YPEEMIQTGIS+IDVM SI+RGQKIPLFS AGLPHNEIAAQI RQAGLV++ +G++++F IVFAAMGVN ETA+FF+ +FEENGSME+ LF+NLANDPTIERI+TPR+ALTTAEYLAY+CGKHVLVILTDMSSYADALREVSAAREEVPGRRG+PGYMYTDLA IYERAGR+ GR GSITQIPILTMPNDDITHP Sbjct: 103 VSEDMLGRVFNGSGIPIDDGPPVLAEQYRDIQGIPINPRARVYPEEMIQTGISSIDVMTSISRGQKIPLFSGAGLPHNEIAAQIVRQAGLVRK---------EGKQEDFCIVFAAMGVNQETARFFRTEFEENGSMEKTVLFMNLANDPTIERIVTPRLALTTAEYLAYDCGKHVLVILTDMSSYADALREVSAAREEVPGRRGFPGYMYTDLACIYERAGRVLGRAGSITQIPILTMPNDDITHP 339
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_PYRHO (V-type ATP synthase beta chain OS=Pyrococcus horikoshii GN=atpB PE=3 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 4.808e-95 Identity = 169/250 (67.60%), Postives = 202/250 (80.80%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++ GEE++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA++ HVLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGRI GRKGSITQ+PILTMP+DDITHP Sbjct: 80 LKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------------GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGSITQMPILTMPDDDITHP 317
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_PYRFU (V-type ATP synthase beta chain OS=Pyrococcus furiosus GN=atpB PE=3 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 1.827e-94 Identity = 167/250 (66.80%), Postives = 202/250 (80.80%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++ GEE++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA++ HVLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP Sbjct: 77 LKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNKLAAQIARQAKVL------------GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_PYRAB (V-type ATP synthase beta chain OS=Pyrococcus abyssi GN=atpB PE=3 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 9.067e-94 Identity = 167/250 (66.80%), Postives = 201/250 (80.40%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++ GEE++FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA++ VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGRI G+KGSITQ+PILTMP+DDITHP Sbjct: 80 LKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------------GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHP 317
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_THESI (V-type ATP synthase beta chain OS=Thermococcus sp. (strain KI) GN=atpB PE=3 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.547e-93 Identity = 167/250 (66.80%), Postives = 200/250 (80.00%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++ GEE+ FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA++ VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP Sbjct: 78 LKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHP 315
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_THEGJ (V-type ATP synthase beta chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=atpB PE=3 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.547e-93 Identity = 167/250 (66.80%), Postives = 200/250 (80.00%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++ GEE+ FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA++ VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP Sbjct: 78 LKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHP 315
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_PYRKO (V-type ATP synthase beta chain OS=Pyrococcus kodakaraensis GN=atpB PE=3 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.547e-93 Identity = 167/250 (66.80%), Postives = 200/250 (80.00%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++ GEE+ FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA++ VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP Sbjct: 80 LKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHP 317
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_THEON (V-type ATP synthase beta chain OS=Thermococcus onnurineus (strain NA1) GN=atpB PE=3 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 2.638e-93 Identity = 165/250 (66.00%), Postives = 200/250 (80.00%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS+DMLGR+FNG GKPID GP I+PE D+ G+ +NP R YP + IQTG+S ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++ GEE+ FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA++ VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP Sbjct: 80 LKVPVSMDMLGRVFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGVSAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHP 317
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_DESSY (V-type ATP synthase beta chain OS=Desulfurococcus sp. (strain SY) GN=atpB PE=3 SV=2) HSP 1 Score: 340.887 bits (873), Expect = 4.500e-93 Identity = 166/250 (66.40%), Postives = 199/250 (79.60%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++ GEE+ FA+VFAAMG+ E A FFK+ FEE G++ER LFLNLA+DP IERIITPR+ALT AEYLA++ VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYER GR+ G+KGSITQ+PILTMP+DDITHP Sbjct: 78 LKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERGGRVRGKKGSITQMPILTMPDDDITHP 315
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METTH (V-type ATP synthase beta chain OS=Methanobacterium thermoautotrophicum GN=atpB PE=3 SV=2) HSP 1 Score: 339.732 bits (870), Expect = 1.002e-92 Identity = 165/249 (66.27%), Postives = 201/249 (80.72%), Query Frame = 1 Query: 7 KTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 K VSLDM+GRIF+G+GKPID GP I+PE LDI+GS +NP+ R +P E IQTGISTID MN++ RGQK+P+FS +GLPHNE+AAQI RQA ++ EE FA++FAAMG+ E A +F RDFE G++ERVT+F+NLA+DP IERIITPR+ALTTAEY A+E HVLVILTD+++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA +YERAGRI G++GSITQ+PIL MP DDITHP Sbjct: 83 KIGVSLDMMGRIFDGTGKPIDGGPEIIPEKELDINGSPMNPAAREFPAEFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVL------------AEESEFAVIFAAMGITHEEANYFMRDFERTGALERVTVFMNLADDPAIERIITPRMALTTAEYFAFEHDMHVLVILTDLTNYCEALREISAAREEVPGRRGYPGYMYTDLASLYERAGRIVGKEGSITQMPILVMPQDDITHP 319 The following BLAST results are available for this feature:
BLAST of CN188190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188190 ID=CN188190; Name=CN188190; organism=Citrus sinensis; type=EST; length=753bpback to top |