CN188190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_HALMA (V-type ATP synthase beta chain OS=Haloarcula marismortui GN=atpB PE=3 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.147e-88 Identity = 158/253 (62.45%), Postives = 198/253 (78.26%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDN---FAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PV+ D+LGR+ +G+G+PID GP I+P+ DI G +INP R YPEE IQTG+S ID MN++ RGQK+P+FSA+GLPHN++A QI RQA + + EDGE+D FA++F AMG+ E A F DFE G++ER +F+NLA+DP +ER ITPR+ALTTAEYLA+E HVLVILTDM++Y +ALRE+ AAREEVPGRRGYPGYMYTDLAQ+YERAGRIEGR+GS+TQ+PILTMP DD THP Sbjct: 75 MKMPVTEDLLGRVMDGTGQPIDGGPEIVPDERRDIVGEAINPFSREYPEEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLALQIARQATVPEE--------EDGEDDEGSEFAVIFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTITPRLALTTAEYLAFEKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQLPILTMPGDDDTHP 319
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_HALVO (V-type ATP synthase beta chain OS=Halobacterium volcanii GN=atpB PE=1 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.498e-88 Identity = 157/250 (62.80%), Postives = 195/250 (78.00%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PV+ D+LGR+ +GSG+PID GP I+P+ DI G++INP R YPEE IQTG+S ID MN++ RGQK+P+FSA+GLPHN++A QI RQA + + E GEE FA+VF AMG+ E A F DFE G++ER +F NLA+DP +ER +TPR+ALTTAEYLA++ HVLVILTDM++Y +ALRE+ AAREEVPGRRGYPGYMYTDLAQ+YERAGRI+GR GS+TQIPILTMP DD THP Sbjct: 75 LKMPVTEDLLGRVLDGSGQPIDGGPEIVPDERRDIVGAAINPYSREYPEEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLALQIARQATVPEDEES-------GEESEFAVVFGAMGITQEEANEFMEDFERTGALERSVVFTNLADDPAVERTVTPRLALTTAEYLAFDKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIQGRDGSVTQIPILTMPGDDDTHP 317
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METBF (V-type ATP synthase beta chain OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=atpB PE=3 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 4.358e-88 Identity = 155/250 (62.00%), Postives = 198/250 (79.20%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K P S+D+LGRI +GSG+P+D GP I+P+ LDI+G+++NP R P++ IQTGISTID N++ RGQK+P+FSA+GLPHNEIA QI RQA + G E FA+VFAAMG+ E AQ+F DFE+ G++ER +FLNLA+DP +ERI+TPR+ALT AEYLAYE G HVLVILTD+++YA+ALR++ AAR E+PGRRGYPGYMYTDLA +YERAG ++G KGS+TQIPIL+MP DDITHP Sbjct: 76 LKLPASIDLLGRILSGSGEPLDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIALQIARQAAV------------PGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEIPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHP 313
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METBA (V-type ATP synthase beta chain OS=Methanosarcina barkeri GN=atpB PE=3 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 4.358e-88 Identity = 155/250 (62.00%), Postives = 198/250 (79.20%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K P S+D+LGRI +GSG+P+D GP I+P+ LDI+G+++NP R P++ IQTGISTID N++ RGQK+P+FSA+GLPHNEIA QI RQA + G E FA+VFAAMG+ E AQ+F DFE+ G++ER +FLNLA+DP +ERI+TPR+ALT AEYLAYE G HVLVILTD+++YA+ALR++ AAR E+PGRRGYPGYMYTDLA +YERAG ++G KGS+TQIPIL+MP DDITHP Sbjct: 76 LKLPASIDLLGRILSGSGEPLDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIALQIARQAAV------------PGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEIPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHP 313
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_HALSA (V-type ATP synthase beta chain OS=Halobacterium salinarium GN=atpB PE=1 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 5.692e-88 Identity = 155/250 (62.00%), Postives = 196/250 (78.40%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PV+ D+LGR+ +GSG PID GP I+P+ +DI G +INP R YPEE IQTG+S ID MN++ RGQK+P+FS +GLPH+++A QI RQA + + +TD D E FA+VF AMG+ E A F DFE G++ER +F+NLA+DP +ER +TPR+ALTTAEYLA+E HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLAQ+YERAGRIEG++GS+TQIPILTMP DD THP Sbjct: 75 LKMPVTEDLLGRVLDGSGNPIDGGPDIVPDDRVDIVGEAINPHAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETD----DDEGSEFAVVFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALTTAEYLAFEKDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGKEGSVTQIPILTMPGDDDTHP 320
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_HALS3 (V-type ATP synthase beta chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=atpB PE=3 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 5.692e-88 Identity = 155/250 (62.00%), Postives = 196/250 (78.40%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PV+ D+LGR+ +GSG PID GP I+P+ +DI G +INP R YPEE IQTG+S ID MN++ RGQK+P+FS +GLPH+++A QI RQA + + +TD D E FA+VF AMG+ E A F DFE G++ER +F+NLA+DP +ER +TPR+ALTTAEYLA+E HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLAQ+YERAGRIEG++GS+TQIPILTMP DD THP Sbjct: 75 LKMPVTEDLLGRVLDGSGNPIDGGPDIVPDDRVDIVGEAINPHAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETD----DDEGSEFAVVFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALTTAEYLAFEKDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGKEGSVTQIPILTMPGDDDTHP 320
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_STAMF (V-type ATP synthase beta chain OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=atpB PE=3 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.434e-88 Identity = 159/250 (63.60%), Postives = 195/250 (78.00%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K PVS+DMLGRIF+G G+PID GPPI+PE YLDI+GS INP+ R P E I+TGIS ID +NSI RGQK+P+FS +GLPHN IAAQI RQA + G+E+ FA+VFAA+GV+ + A FF +F+ G++E F+N A+ P IERI PRIALT AE+LA++ HVL ILTDM++Y +ALRE+SAAREEVP RRGYPGYMYTDLA IYERAGR+EG+KGS+TQ+PILTMPNDDITHP Sbjct: 83 LKLPVSIDMLGRIFDGLGRPIDGGPPIVPEDYLDINGSPINPASRLPPSEFIETGISAIDGLNSIVRGQKLPIFSGSGLPHNRIAAQIVRQARV------------RGKEEKFAVVFAAIGVSYDDAMFFIENFKNYGALENAVAFINTADSPVIERIAIPRIALTAAEFLAWKHDMHVLAILTDMTNYCEALRELSAAREEVPSRRGYPGYMYTDLATIYERAGRVEGKKGSVTQMPILTMPNDDITHP 320
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: NTPB_ENTHR (V-type sodium ATPase subunit B OS=Enterococcus hirae GN=ntpB PE=1 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.434e-88 Identity = 156/246 (63.41%), Postives = 193/246 (78.46%), Query Frame = 1 Query: 16 VSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VS DM+GR+F+G G+P DNGP ILPE YLDI+G INP R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPH E+AAQI RQA ++ D+FA+VFAA+G+ E A+FF DF + G+++R +F+NLANDP IERI TPR+ALT AEYLAYE G HVLVI+TDM++YA+ALRE+SAAR EVPGRRGYPGY+YT+LA ++ERAGRI G KGS+TQIPILTMP DD THP Sbjct: 81 VSEDMIGRVFDGLGRPKDNGPEILPEKYLDINGEVINPIARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKELAAQIARQATVLD------------SSDDFAVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLYTNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHP 314
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_ARCFU (V-type ATP synthase beta chain OS=Archaeoglobus fulgidus GN=atpB PE=3 SV=2) HSP 1 Score: 322.783 bits (826), Expect = 1.268e-87 Identity = 160/250 (64.00%), Postives = 192/250 (76.80%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 VK S DMLGRI +GSG+PID GP I+PE I G++INP R YP E IQTGIS ID MN++ RGQK+P+FS +GLPHN+IA QI RQA + GE + FA++FAAMG+ E A F ++FE G++ER +FLNLANDP IER++TPR+ALT AE+LAYE H+LVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGRI GRKG+ITQ+PILTMP DDITHP Sbjct: 75 VKLNCSQDMLGRILSGSGEPIDGGPKIVPEERRPIVGAAINPYARQYPREFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNDIALQIARQAKV------------RGEGEEFAVIFAAMGITYEEAYQFMKEFERTGALERAVVFLNLANDPAIERLLTPRMALTAAEFLAYEYDLHILVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGTITQMPILTMPGDDITHP 312
BLAST of CN188190 vs. ExPASy Swiss-Prot
Match: VATB_METMA (V-type ATP synthase beta chain OS=Methanosarcina mazei GN=atpB PE=1 SV=2) HSP 1 Score: 322.398 bits (825), Expect = 1.656e-87 Identity = 156/250 (62.40%), Postives = 197/250 (78.80%), Query Frame = 1 Query: 4 VKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHP 753 +K P S+D+LGRI +GSG+P D GP I+P+ LDI+G+++NP R P++ IQTGISTID N++ RGQK+P+FSA+GLPHNEIA QI RQA + G E FA+VFAAMG+ E AQ+F DFE+ G++ER +FLNLA+DP +ERI+TPR+ALT AEYLAYE G HVLVILTD+++YA+ALR++ AAR EVPGRRGYPGYMYTDLA +YERAG ++G KGS+TQIPIL+MP DDITHP Sbjct: 76 LKLPASVDLLGRILSGSGEPRDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIALQIARQASV------------PGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHP 313 The following BLAST results are available for this feature:
BLAST of CN188190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188190 ID=CN188190; Name=CN188190; organism=Citrus sinensis; type=EST; length=753bpback to top |