CK938798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.690e-41 Identity = 82/177 (46.33%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 104 TDSR-EILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 TD R E+L+S F + + + P + M + A+Q+INDEL LDGN R NLA+F TW KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++++ GKP DKPN++ G VQ+CW KFARY++VEL+E+ + Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM 182
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 6.423e-41 Identity = 81/177 (45.76%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 104 TDSR-EILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 TD R E+L+S F + + + P + M + A+Q+INDEL LDGN R NLA+F TW KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++++ GKP +KPN++ G VQ+CW KFARY++VEL+E+ + Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGP-VQICWHKFARYWDVELREIPM 182
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 8.681e-38 Identity = 75/185 (40.54%), Postives = 117/185 (63.24%), Query Frame = 2 Query: 83 MVISTTETDSREILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYD--KPNIITGANVQVCWEKFARYFEVELKEVKL 631 M+ D E L F S + +P++K+ S+ AYQ++ DE++ +GN RLNLA+F T+M PE KL+ ++ KN +D EYP TTE++NRCVNMIA L+N ++ + +G T+GSSEA ML G+A K W+++ ++ G + KPN++ + QVCWEKF Y+++E++EV + Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWN--ASEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCVYWDIEMREVPM 183
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 8.681e-38 Identity = 75/185 (40.54%), Postives = 117/185 (63.24%), Query Frame = 2 Query: 83 MVISTTETDSREILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYD--KPNIITGANVQVCWEKFARYFEVELKEVKL 631 M+ D E L F S + +P++K+ S+ AYQ++ DE++ +GN RLNLA+F T+M PE KL+ ++ KN +D EYP TTE++NRCVNMIA L+N ++ + +G T+GSSEA ML G+A K W+++ ++ G + KPN++ + QVCWEKF Y+++E++EV + Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWN--ASEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCIYWDIEMREVPM 183
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.299e-37 Identity = 77/183 (42.08%), Postives = 117/183 (63.93%), Query Frame = 2 Query: 83 MVISTTETDSREILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 M + +T+ + ++AS I ++ + + S E +I DEL+LDGN + NLA+F T + E L+ I+KN +D DEYP T E+++RCV+++A L+N+P + +G T GSSEA ML G+A K +W++ K+QGKP+DKPNI+TG VQ+CW KFA YF++EL+EV + Sbjct: 1 MSLHHVKTNKYKGFYDSYASPPATKEISKYSLKEESNKPEVIRDLIIDELLLDGNAKQNLATFCQTDLDKEIHVLMDKCIDKNMIDKDEYPQTAEIESRCVHILADLWNSP--ESSETIGCSTTGSSEAAMLGGMALKWRWRENRKKQGKPFDKPNIVTGP-VQICWHKFALYFDIELREVPM 180
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.764e-36 Identity = 73/175 (41.71%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 107 DSREILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 D + L + I +FK+ D+ E ++I DEL+LDGN + NLA+F T + ++ I+KN +D DEYP + E++NRC++++A L+N P D +G T GSSEA ML GLA K W++ K+ G PYDKPNI+TG VQ+CW KFA YF++E++E+ + Sbjct: 7 DKHKSLYDNYVQSATTEEIAKFKLADDPNEPETIKKLIMDELLLDGNSKQNLATFCQTDLDKNIHSIMDKCIDKNMIDKDEYPQSAEIENRCLHILADLWNAP--DSSDTIGCSTTGSSEAAMLGGLALKWNWRENRKKLGLPYDKPNIVTGP-VQICWHKFALYFDIEIREIPM 178
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.879e-35 Identity = 72/153 (47.06%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 167 RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEV 625 ++ +P +P + +YQ+I++EL LDGNP LNLASFV T+ + KL+ ++ KN D DEYP EL RC++M+A L++ D+ +G T GSSEAIML GLA K++W+ ++K GK KPNII + QV EKF RYFEVE + V Sbjct: 59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADNDEYPQLIELTQRCISMLAQLWH--ANPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLV 209
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.930e-33 Identity = 70/168 (41.67%), Postives = 105/168 (62.50%), Query Frame = 2 Query: 134 FASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYD--KPNIITGANVQVCWEKFARYFEVELKEVKL 631 F S +IP++ + M AYQ++ D+LM +GN R NLA+F T+M E + L+ ++ KN +D EYP T EL+NRCVN++A L+N P D + +G TVGSSEA ML GLA K +W+ +++G +PN+I + QVCWEKF Y++V+++ V + Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KDMSYLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPM 184
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.434e-32 Identity = 69/168 (41.07%), Postives = 105/168 (62.50%), Query Frame = 2 Query: 134 FASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYD--KPNIITGANVQVCWEKFARYFEVELKEVKL 631 F S +IP++ + M AYQ++ D+LM +GN R NLA+F T+M E + L+ ++ KN +D EYP T EL+NRCVN++A L+N P + + +G TVGSSEA ML GLA K +W+ +++G +PN+I + QVCWEKF Y++V+++ V + Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KEMSYLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPM 184
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.533e-31 Identity = 66/180 (36.67%), Postives = 108/180 (60.00%), Query Frame = 2 Query: 98 TETDSREILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPY--DKPNIITGANVQVCWEKFARYFEVELKEVKL 631 ++ + L F S IP++ + + AY+++ DEL+ +G+ R NLA+F T+M E KL+ ++ KN +D EYP T EL+NRCVN+IA L++ P D+ +G T+GSSEA ML G+A K W+++ ++ G KPN++ + QVCWEKF Y++++++ V + Sbjct: 4 SKENKESYLEPVFGSSAEDRDIPKYTLAKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNIIADLWHAP--KDQKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSGYQVCWEKFCVYWDIDMRVVPM 181 The following BLAST results are available for this feature:
BLAST of CK938798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938798 ID=CK938798; Name=CK938798; organism=Citrus sinensis; type=EST; length=632bpback to top |