CK938798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.321e-86 Identity = 154/183 (84.15%), Postives = 167/183 (91.26%), Query Frame = 2 Query: 83 MVISTTETDSREILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 MV+S T + S ++STFAS YVR ++PRFKMPDNS+PKEAAYQ+INDELMLDGNPRLNLASFVTTWM PECDKL+M SINKNYVDMDEYPVTTELQNRCVNMIAHLFN P+ D +TAVGVGTVGSSEAIMLAGLAFKRKWQ K+K QGKP DKPNI+TGANVQVCWEKFARYFEVELKEVKL Sbjct: 1 MVLSKTVSQSDVSIHSTFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGETAVGVGTVGSSEAIMLAGLAFKRKWQNKMKAQGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 5.549e-85 Identity = 150/184 (81.52%), Postives = 167/184 (90.76%), Query Frame = 2 Query: 83 MVISTTET-DSREILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 MV++TT DS E L+ TFAS YV+ +P+FKMP SMPKEAAYQ++NDELMLDGNPRLNLASFV+TWM PECDKL+M+SINKNYVDMDEYPVTTELQNRCVNM+AHLF+ PV DD+TAVGVGTVGSSEAIMLAGLAFKRKWQ K K +GKP+DKPNI+TGANVQVCWEKFARYFEVELKEVKL Sbjct: 1 MVLTTTSIRDSEESLHCTFASRYVQEPLPKFKMPKKSMPKEAAYQIVNDELMLDGNPRLNLASFVSTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAVGVGTVGSSEAIMLAGLAFKRKWQSKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL 184
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2) HSP 1 Score: 313.153 bits (801), Expect = 7.248e-85 Identity = 150/183 (81.97%), Postives = 167/183 (91.26%), Query Frame = 2 Query: 83 MVISTTETDSREILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 MV+S ++S ++STFAS YVR ++PRFKMP+NS+PKEAAYQ+INDELMLDGNPRLNLASFVTTWM PECDKL+M+SINKNYVDMDEYPVTTELQNRCVNMIAHLFN P+ + +TAVGVGTVGSSEAIMLAGLAFKRKWQ K K +GKP DKPNI+TGANVQVCWEKFARYFEVELKEVKL Sbjct: 1 MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 5.031e-78 Identity = 138/183 (75.41%), Postives = 159/183 (86.89%), Query Frame = 2 Query: 83 MVISTTETDSREILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 MV++ T T+ + + F S YVR +P++++ +NS+PK+AAYQ+I DELMLDGNPRLNLASFVTTWM PECDKL+M SINKNYVDMDEYPVTTELQNRCVN+IA LFN P+ + +TAVGVGTVGSSEAIMLAGLAFKRKWQ K K +GKPYDKPNI+TGANVQVCWEKFARYFEVELKEV L Sbjct: 1 MVLTKTATNDESVC-TMFGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVNL 182
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.690e-41 Identity = 82/177 (46.33%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 104 TDSR-EILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 TD R E+L+S F + + + P + M + A+Q+INDEL LDGN R NLA+F TW KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++++ GKP DKPN++ G VQ+CW KFARY++VEL+E+ + Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM 182
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.690e-41 Identity = 82/177 (46.33%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 104 TDSR-EILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 TD R E+L+S F + + + P + M + A+Q+INDEL LDGN R NLA+F TW KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++++ GKP DKPN++ G VQ+CW KFARY++VEL+E+ + Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM 182
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.690e-41 Identity = 82/177 (46.33%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 104 TDSR-EILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 TD R E+L+S F + + + P + M + A+Q+INDEL LDGN R NLA+F TW KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++++ GKP DKPN++ G VQ+CW KFARY++VEL+E+ + Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM 182
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEA_SHIFL (Glutamate decarboxylase alpha OS=Shigella flexneri GN=gadA PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 1.690e-41 Identity = 82/177 (46.33%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 104 TDSR-EILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 TD R E+L+S F + + + P + M + A+Q+INDEL LDGN R NLA+F TW KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++++ GKP DKPN++ G VQ+CW KFARY++VEL+E+ + Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM 182
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.690e-41 Identity = 82/177 (46.33%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 104 TDSR-EILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 TD R E+L+S F + + + P + M + A+Q+INDEL LDGN R NLA+F TW KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++++ GKP DKPN++ G VQ+CW KFARY++VEL+E+ + Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM 182
BLAST of CK938798 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.690e-41 Identity = 82/177 (46.33%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 104 TDSR-EILNSTFASXYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMGPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKIKEQGKPYDKPNIITGANVQVCWEKFARYFEVELKEVKL 631 TD R E+L+S F + + + P + M + A+Q+INDEL LDGN R NLA+F TW KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++++ GKP DKPN++ G VQ+CW KFARY++VEL+E+ + Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM 182 The following BLAST results are available for this feature:
BLAST of CK938798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938798 ID=CK938798; Name=CK938798; organism=Citrus sinensis; type=EST; length=632bpback to top |