CN187836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187836 vs. ExPASy Swiss-Prot
Match: DNA2_YEAST (DNA replication ATP-dependent helicase DNA2 OS=Saccharomyces cerevisiae GN=DNA2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12 Identity = 44/124 (35.48%), Postives = 72/124 (58.06%), Query Frame = -3 Query: 413 CEEHLDLAGTGSFYNEGEAEIVVHHVFSLICAGVSPSAIAVQSPYVAQVQLLRERLDELPEAAGVEVATIDSFQGREADAVIISMVRSNT-LGAVGFLGDSRRMNVAITRACKHVAVVCDSSTI 781 C + ++ + + N GEAE+ + V ++ +GV I V + Y AQ++LL++ ++ G+E+ T D FQGR+ +IISMVR N+ L L + RR+NVA+TRA + ++ STI Sbjct: 1323 CPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIFNK-NVYDGLEILTADQFQGRDKKCIIISMVRRNSQLNGGALLKELRRVNVAMTRAKSKLIIIGSKSTI 1445
BLAST of CN187836 vs. ExPASy Swiss-Prot
Match: DNA2L_MOUSE (DNA2-like helicase OS=Mus musculus GN=Dna2 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12 Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 422 GSFYNEGEAEIVVHHVFSLICAGVSPSAIAVQSPYVAQVQLLRERLDELPEAAGVEVATIDSFQGREADAVIISMVRSNTLGAVG-FLGDSRRMNVAITRACKHVAVVCDS 751 G N EA ++V + I AG SPS I V +PY Q++++ + L VEV T+D +QGR+ +++S VRSN G +G L D RR+NVA+TRA KH ++ S Sbjct: 910 GGVSNVTEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLAR-SSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVALTRA-KHKLILLGS 1018
BLAST of CN187836 vs. ExPASy Swiss-Prot
Match: DNA2_SCHPO (DNA replication ATP-dependent helicase dna2 OS=Schizosaccharomyces pombe GN=dna2 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.202e-12 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = -3 Query: 380 NEGEAEIVVHHVFSLICAGVSPSAIAVQSPYVAQVQLLRERLDELPEAAGVEVATIDSFQGREADAVIISMVRSNTLGAVG-FLGDSRRMNVAITRACKHVAVVCDSSTICHNTFLARLLR 739 N EA ++ V S + GV S+I + S Y +QV+LL + L E +E+ T+D +QGR+ D ++IS VRSN+ VG L D R+NVA++RA + ST+ + ++ LL+ Sbjct: 1215 NHTEAFLIEQAVSSFLERGVKQSSIGIISIYKSQVELLSKNLKSFTE---IEINTVDRYQGRDKDIILISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCIMFGSLSTLSSSNIVSHLLK 1332
BLAST of CN187836 vs. ExPASy Swiss-Prot
Match: Y104_METJA (Uncharacterized ATP-dependent helicase MJ0104 OS=Methanocaldococcus jannaschii GN=MJ0104 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.406e-12 Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 431 SFYNEGEAEIVVHHVFSLICAGVSPSAIAVQSPYVAQVQLLRERLDELPEAAGVEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRMNVAITRACKHVAVV 748 S+YN EAE V+ V L+ + + I +PY AQV+ LR +E +EV T+D FQGRE +A++IS VR+ GFL D RR+NVAITRA + + ++ Sbjct: 533 SYYNIEEAEKVLEIVKKLVKYKIPTNVI---TPYDAQVRYLRRLFEE--HNIDIEVNTVDGFQGRENEAIVISFVRTKNF---GFLKDLRRLNVAITRAKRKLILI 630
BLAST of CN187836 vs. ExPASy Swiss-Prot
Match: Y4399_DICDI (Probable helicase DDB_G0274399 OS=Dictyostelium discoideum GN=DDB_G0274399 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.737e-11 Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = -3 Query: 377 GTGSFYNEGEAEIVVHHVFSLICAGVSP-----SAIAVQSPYVAQVQLLRERLDELPEAAGVEVATIDSFQGREADAVIISMVRSNTL--GAVGFLGDSRRMNVAITRACKHVAVVCDSSTICHNTFLARLLRH 757 G GS +NE E ++ ++ +F L V P S I + SPY QV LRE P G+ + T+D FQGRE + +I S VR+ +GFL D RRMNVA+TR + ++ ++ + N L++H Sbjct: 711 GGGSVFNEHECKMAMY-LFQLFTK-VYPDEDFASRIGIISPYRQQVLALREIFKNYP---GISIDTVDGFQGREREIIIFSCVRAPVEEGAGIGFLSDVRRMNVALTRPRSSLLILGNTKALSINKDWNELIQH 839
BLAST of CN187836 vs. ExPASy Swiss-Prot
Match: ZNFX1_MOUSE (NFX1-type zinc finger-containing protein 1 OS=Mus musculus GN=Znfx1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = -3 Query: 371 SFYNEGEAEIVVHHVFSLICAGVSPSAIAVQSPYVAQVQLLRERLDELPEAAGVEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRMNVAITRACKHVAVVCDSSTICHNTFLARLLRHIR 748 S N+ EA +V L+C PS I + + Y Q+ LR +L + AG++V +D +QG E D +++S+VRSN G VGFL R+ VA++RA K + + + + +R++ +R Sbjct: 1120 SHQNQHEAHFLVELCQYLLCQEYLPSQITILTTYTGQLFCLR-KLMPVKTFAGIKVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQIPNRICVALSRAKKGMYCIGNMQMLAKVPLWSRIIHTLR 1244
BLAST of CN187836 vs. ExPASy Swiss-Prot
Match: ZNFX1_HUMAN (NFX1-type zinc finger-containing protein 1 OS=Homo sapiens GN=ZNFX1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11 Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = -3 Query: 371 SFYNEGEAEIVVHHVFSLICAGVSPSAIAVQSPYVAQVQLLRERLDELPEAAGVEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRMNVAITRACKHVAVVCDSSTICHNTFLARLLRHIR 748 S N+ EA VV +C PS I + + Y Q+ LR +L AGV V +D +QG E D +++S+VRSN G VGFL S R+ VA++RA K + + + + ++++ +R Sbjct: 1127 SHQNQHEAHFVVELCKYFLCQEYLPSQITILTTYTGQLFCLR-KLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLR 1251
BLAST of CN187836 vs. ExPASy Swiss-Prot
Match: YGSA_SCHPO (Uncharacterized ATP-dependent helicase C29A10.10c OS=Schizosaccharomyces pombe GN=SPBC29A10.10c PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11 Identity = 51/167 (30.54%), Postives = 79/167 (47.31%), Query Frame = -3 Query: 323 LGCEEHLDLAGTGSF------YNEGEAEIVVHHVFSLICAGVS---PSAIAVQSPYVAQVQLLRERLDELPEAA---GVEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRMNVAITRACKHVAVVCDSSTICHNTFLARLLRHIRYFGRVKHAEPGSFGGS 787 LG ++ GT +F YN EA ++ LI ++ I V +PY +QVQ LR + + +++ T+D FQG+E D +I S VRS+ G +GFL D RR+NVA+TRA + +V +S + L+ + G + F S Sbjct: 1622 LGIYRFFNVHGTEAFSNSKSLYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQEDIFYSLIEDAKTRGVWRDLSANQFKNS 1788 The following BLAST results are available for this feature:
BLAST of CN187836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187836 ID=CN187836; Name=CN187836; organism=Citrus sinensis; type=EST; length=795bpback to top |