CN187807
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STAD_CARTI (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Carthamus tinctorius PE=1 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 1.358e-100 Identity = 174/249 (69.88%), Postives = 205/249 (82.33%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDGVRDETGAS +PWA+W R+WTAEENRHGDLL ++LYLSGRVDM I+KT+QYLI +GMDP TEN+PYLGF+YTSFQERATF+SHGNTAR +K+ GD LA+ICGTIASDEKRHE AY +IVEKL E+DP G ++A AD+M KKI+MPAHLMYDG D LF HF+AVAQRLGVYTA DYADILEFL+GRW R+AQ++VCGL PRIRRL+E A RAK + P+V FSWIF+R++ L Sbjct: 150 TLDGVRDETGASLTPWAVWTRAWTAEENRHGDLLHTYLYLSGRVDMRQIQKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFVSHGNTARHAKDHGDVKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKISMPAHLMYDGRDDNLFEHFSAVAQRLGVYTAKDYADILEFLVGRWKVADLTGLSGEGRKAQDYVCGLPPRIRRLEERAQGRAK--EGPVVPFSWIFDRQVKL 396
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STAD_SOLCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum commersonii PE=2 SV=2) HSP 1 Score: 362.073 bits (928), Expect = 1.960e-99 Identity = 172/249 (69.08%), Postives = 201/249 (80.72%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDGVRDETGAS +PWAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHGNTAR +KE GD LA++CG IA+DEKRHE AY +IVEKL EVDP G ++A+AD+M KKI+MPAHLMYDG D LF HF+ VAQRLGVYTA DYADILEFL+GRW +A+++VCGLAPRIR+L+E A RAK+ P V FSW+F +++ L Sbjct: 147 TLDGVRDETGASLTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARHAKEHGDMKLAQVCGIIAADEKRHETAYTKIVEKLFEVDPDGTVLAVADMMRKKISMPAHLMYDGRDDNLFEHFSTVAQRLGVYTAKDYADILEFLVGRWEIEKLTGLSGEGHKARDYVCGLAPRIRKLEERAQARAKQKAP--VPFSWVFGKDIKL 393
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STAD_OLEEU (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Olea europaea PE=2 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 5.704e-99 Identity = 173/249 (69.48%), Postives = 200/249 (80.32%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDGVRDETGAS +PWAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHGNTARL+KE GD LA+ICG IA+DEKRHE AY +IVEKL E+DP G ++A+AD+M KK++MPAHLMYDG D LF +F++VAQRLGVYTA DYADILEFL+GRW R+AQ++VC L PRIRRL+E A R KK FSWIF RE++L Sbjct: 144 TLDGVRDETGASLTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARLAKEHGDLKLAQICGIIAADEKRHETAYTKIVEKLFEIDPDGTVLALADMMRKKVSMPAHLMYDGQDDNLFENFSSVAQRLGVYTAKDYADILEFLVGRWDIEKLTGLSGEGRKAQDYVCTLPPRIRRLEERAQSRVKKAS--ATPFSWIFGREINL 390
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STAD_SOLTU (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 358.992 bits (920), Expect = 1.660e-98 Identity = 174/249 (69.88%), Postives = 200/249 (80.32%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDGVRDETGA+ +PWAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGFVYTS ++ TF+SHGNTARL+KE GD LA+ICG+IA+DEKRHE AY +IVEKLLEVDP GA++AI D+M K I+MPAHLMYDG D LF HF+AVAQRLGVYTA DYADILEF +GRW RRAQ++VCGLAPRIR+L+E A RAK K V FSWIF +E+ L Sbjct: 147 TLDGVRDETGATVTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENNPYLGFVYTSLRKGVTFVSHGNTARLAKEHGDMKLAQICGSIAADEKRHETAYTKIVEKLLEVDPDGAVLAIGDMMRKNISMPAHLMYDGRDDNLFEHFSAVAQRLGVYTAKDYADILEFHVGRWEVEKLTGLSSEGRRAQDYVCGLAPRIRKLEERAQARAKHAKS--VPFSWIFGKEIKL 393
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STAD_BRANA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 2.168e-98 Identity = 175/249 (70.28%), Postives = 199/249 (79.92%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHGNTAR +KE GD LA+ICGTIA+DEKRHE AY +IVEKL E+DP G ++A AD+M KKI+MPAHLMYDG D LF +F++VAQRLGVYTA DYADILEFL+GRW +AQE++CGL PRIRRL E A RAK K P V FSWI +RE+ L Sbjct: 152 TLDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARQAKEHGDLKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVMAFADMMRKKISMPAHLMYDGRDESLFDNFSSVAQRLGVYTAKDYADILEFLVGRWKIESLTGLSGEGNKAQEYLCGLTPRIRRLDERAQARAK--KGPKVPFSWIHDREVQL 398
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STADS_BRANA (Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 2.168e-98 Identity = 173/249 (69.48%), Postives = 199/249 (79.92%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDGVRDETGAS + WA+W R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGF+YTSFQERATF+SHGNTAR +KE GD LA+ICGTIA+DEKRHE AY +IVEKLLE+DP G ++A AD+M KKI+MPAHLMYDG D LF +F++VAQRLGVYTA DYADILEFL GRW +AQE++CGL PRIRRL E A RAK K P + FSWI +RE+ L Sbjct: 153 TLDGVRDETGASPTSWAVWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFVSHGNTARQAKEHGDLKLAQICGTIAADEKRHETAYTKIVEKLLEIDPDGTVVAFADMMRKKISMPAHLMYDGRDDNLFDNFSSVAQRLGVYTAKDYADILEFLAGRWRIESLTGLSGEGNKAQEYLCGLTPRIRRLDERAQARAK--KGPKIPFSWIHDREVQL 399
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STAD_RICCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 2.831e-98 Identity = 173/249 (69.48%), Postives = 201/249 (80.72%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TEN+PYLGF+YTSFQERATFISHGNTAR +KE GD LA+ICGTIA+DEKRHE AY +IVEKL E+DP G ++A AD+M KKI+MPAHLMYDG D LF HF+AVAQRLGVYTA DYADILEFL+GRW ++AQ++VC L PRIRRL+E A RAK + P + FSWIF+R++ L Sbjct: 150 TLDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKISMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDYVCRLPPRIRRLEERAQGRAK--EAPTMPFSWIFDRQVKL 396
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STAD_CUCSA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 4.829e-98 Identity = 170/249 (68.27%), Postives = 200/249 (80.32%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDGVRDETGAS +PWAIW R+WTAEENRHGDLL +LYLSGRVDM +EKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHGNTARL+KE GD LA+ICGTI +DEKRHE AY +IVEKL E+DP G +IA ++M KK++MPAHLMYDG D LF HF+AVAQRLGVYTA DYADILEFL+GRW ++AQ++VC L RIR+L+E A RAK + P + FSWIF+R++ L Sbjct: 150 TLDGVRDETGASPTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQVEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARLAKEHGDIKLAQICGTITADEKRHETAYTKIVEKLFEIDPEGTVIAFEEMMRKKVSMPAHLMYDGRDDNLFHHFSAVAQRLGVYTAKDYADILEFLVGRWKVESLTGLSGEGQKAQDYVCALPARIRKLEERAQGRAK--EGPTIPFSWIFDRQVKL 396
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STAD_SPIOL (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 4.088e-97 Identity = 169/249 (67.87%), Postives = 200/249 (80.32%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDG +DETGAS + WA+W R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGFVYTSFQERATF+SHGN+ARL+KE GD +A+ICG IASDEKRHE AY +IVEKL E+DP ++A AD+M KKI+MPAHLMYDG D LF HF+AVAQRLGVYTA DYADILEFL+GRW ++AQ++VC L PRIRRL+E A +RAK + P + FSWIF+R++ L Sbjct: 153 TLDGAKDETGASPTSWAVWTRAWTAEENRHGDLLNKYLYLSGRVDMRSIEKTIQYLIGSGMDPRTENNPYLGFVYTSFQERATFVSHGNSARLAKEHGDLKMAQICGIIASDEKRHETAYTKIVEKLFEIDPDATVLAFADMMKKKISMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWEVEKLTGLSSEGQKAQDYVCSLPPRIRRLEERARERAK--QAPSMPFSWIFDRQVKL 399
BLAST of CN187807 vs. ExPASy Swiss-Prot
Match: STAD_ELAGV (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Elaeis guineensis var. tenera PE=2 SV=2) HSP 1 Score: 354.369 bits (908), Expect = 4.088e-97 Identity = 172/249 (69.08%), Postives = 199/249 (79.92%), Query Frame = 2 Query: 5 TLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIASDEKRHENAYARIVEKLLEVDPTGAMIAIADLMNKKITMPAHLMYDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 751 TLDGVRDETGAS + WA+W R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TEN+PYLGF+YTSFQERATFISHGNTAR +KE GD LA+ICGTIASDEKRHE AY +IVEKL E+DP G +++ AD+M KKI+MPAHLMYDG D LF HF+AVAQRLGV TA DYADILEFLI RW +RAQ+FVC LAPRIRR++E A +RAK + P + SWI+ RE+ L Sbjct: 147 TLDGVRDETGASLTSWAVWTRAWTAEENRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNTARHAKEHGDVKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDGTVLSFADMMKKKISMPAHLMYDGQDDNLFEHFSAVAQRLGVDTAKDYADILEFLINRWKVGELTGFSGEGKRAQDFVCTLAPRIRRIEERAQERAK--QAPRIPCSWIYGREVQL 393 The following BLAST results are available for this feature:
BLAST of CN187807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187807 ID=CN187807; Name=CN187807; organism=Citrus sinensis; type=EST; length=777bpback to top |