CK938478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.798e-30 Identity = 58/71 (81.69%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 7 TNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 TNSLFSAWD QFYPE EKGSH++QIDV++EKGG+ INP+FFVDF EPDGP+LAHEMRYPGGDCTSDIWI Sbjct: 420 TNSLFSAWDRQFYPEIMEKGSHIIQIDVDTEKGGLTINPDFFVDFGDEPDGPSLAHEMRYPGGDCTSDIWI 490
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP1_XENTR (Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 7.815e-26 Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 1 Query: 4 VTNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 VTNSL+S WD QFYP+ ++GS MLQIDV++EKGG+ +NPNF VDF EP GP LAHE+RYPGGDC+SDIW+ Sbjct: 401 VTNSLYSKWDKQFYPDMIKEGSVMLQIDVDTEKGGLKLNPNFLVDFGKEPGGPVLAHELRYPGGDCSSDIWV 472
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.021e-25 Identity = 50/72 (69.44%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 4 VTNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 VT SL+SAWD QFYP+ ++GS M+QIDVN++ GG+ +N NF VDF AEP+GPALAHE+RYPGGDCTSDIW+ Sbjct: 386 VTTSLYSAWDKQFYPDLIKEGSVMMQIDVNTDTGGLKLNENFLVDFGAEPEGPALAHELRYPGGDCTSDIWL 457
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.021e-25 Identity = 49/72 (68.06%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 4 VTNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 VT+S++S WD QFYP+ ++G+ MLQIDV++EKGG+ +NPNF VDF EPDGP LAHE+RYPGGDC+SDIWI Sbjct: 401 VTSSIYSIWDKQFYPDMLKEGAVMLQIDVDTEKGGLKLNPNFLVDFGKEPDGPVLAHELRYPGGDCSSDIWI 472
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.021e-25 Identity = 50/72 (69.44%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 4 VTNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 VT+SL+S WD QFYP+ ++G+ MLQIDV+++KGG+ +NPNF VDF EPDGP LAHE+RYPGGDCTSDIWI Sbjct: 401 VTSSLYSIWDKQFYPDLLKEGAVMLQIDVDTKKGGLKLNPNFLVDFGKEPDGPVLAHEIRYPGGDCTSDIWI 472
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 8.641e-25 Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 4 VTNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 VT SL+SAWD QFYP+ +GS MLQ+DV++ KGG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 401 VTTSLYSAWDKQFYPDLIREGSVMLQVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 1.129e-24 Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 4 VTNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 +T SL+SAWD QFYP+ +GS MLQ+DV++ KGG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 401 ITTSLYSAWDKQFYPDLIREGSVMLQVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.514e-24 Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 4 VTNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 VT SL+SAWD QFYP+ +GS MLQIDV++ +GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIW+ Sbjct: 401 VTTSLYSAWDKQFYPDLIREGSVMLQIDVDTVRGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWL 472
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.284e-24 Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 4 VTNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 VT SL+SAWD QFYP +GS MLQIDV++ GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 401 VTTSLYSAWDKQFYPNLIREGSVMLQIDVDTANGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of CK938478 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 5.601e-24 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 7 TNSLFSAWDCQFYPEPKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 219 T SL+SAWD QFYP+ +GS MLQIDV++ GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 402 TTSLYSAWDKQFYPDLIREGSMMLQIDVDTVNGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472 The following BLAST results are available for this feature:
BLAST of CK938478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938478 ID=CK938478; Name=CK938478; organism=Citrus sinensis; type=EST; length=451bpback to top |