CK937544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: CIRBP_XENTR (Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.257e-15 Identity = 38/79 (48.10%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPS 447 KLFV G++F TTEE L FS++GQV E ++ D+ RS+G+G+VTF E+A++A+ MNGK +DGR + VD S Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVDQAGKS 85
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: RBM3_MOUSE (Putative RNA-binding protein 3 OS=Mus musculus GN=Rbm3 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.064e-14 Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPSRR 453 KLFV G++F+T E+ L D FS FG ++E ++ D+ RS+G+G++TF+ E A +A+ MNG+ LDGR + VD+ S R Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSAR 87
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: CIRBB_XENLA (Cold-inducible RNA-binding protein B OS=Xenopus laevis GN=cirbp-B PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.390e-14 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPS 447 KLF+ G++F T EE L FS++GQ++E ++ D+ RS+G+G+VTF ++A++A+ MNGK +DGR + VD S Sbjct: 6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAMNGKAVDGRQIRVDQAGKS 84
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: CIRBP_RAT (Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.371e-14 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPS 447 KLFV G+SF T E+ L FS++GQ++E ++ D+ RS+G+G+VTF ++A++A+ MNGK +DGR + VD S Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 85
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: CIRBP_PONAB (Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.371e-14 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPS 447 KLFV G+SF T E+ L FS++GQ++E ++ D+ RS+G+G+VTF ++A++A+ MNGK +DGR + VD S Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 85
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: CIRBP_MOUSE (Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.371e-14 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPS 447 KLFV G+SF T E+ L FS++GQ++E ++ D+ RS+G+G+VTF ++A++A+ MNGK +DGR + VD S Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 85
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: CIRBP_HUMAN (Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.371e-14 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPS 447 KLFV G+SF T E+ L FS++GQ++E ++ D+ RS+G+G+VTF ++A++A+ MNGK +DGR + VD S Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 85
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: CIRBP_CRIGR (Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.371e-14 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPS 447 KLFV G+SF T E+ L FS++GQ++E ++ D+ RS+G+G+VTF ++A++A+ MNGK +DGR + VD S Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 85
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: RBM3_RAT (Putative RNA-binding protein 3 OS=Rattus norvegicus GN=Rbm3 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.097e-14 Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPSRR 453 KLFV G++F+T E+ L D FS FG ++E ++ D+ RS+G+G++TF+ E A + + MNG+ LDGR + VD+ S R Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHAGKSAR 87
BLAST of CK937544 vs. ExPASy Swiss-Prot
Match: RBM3_HUMAN (Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.097e-14 Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 211 KLFVKGVSFSTTEEMLADAFSQFGQVTEATIITDKGKNRSKGYGYVTFSTEEEAQNALTEMNGKLLDGRVLFVDNVRPSRR 453 KLFV G++F+T E+ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ LDGR + VD+ S R Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHAGKSAR 87 The following BLAST results are available for this feature:
BLAST of CK937544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937544 ID=CK937544; Name=CK937544; organism=Citrus sinensis; type=EST; length=639bpback to top |