CK936719

Overview
NameCK936719
Unique NameCK936719
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METB_HELPJ (Cystathionine gamma-synthase OS=Helicobacter pylori J99 GN=metB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.192e-36
Identity = 76/187 (40.64%), Postives = 114/187 (60.96%), Query Frame = 1
Query:  268 NEFDPYGALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            NE    GA+S P+YQT+T++Q +   +  Y+Y+RSGNPTR ALE              F SG+A + AV  LL +G+ ++ GDD+YGG  RL ++V  K G+    ++T DL ++  AI P TK +++E+P+NP  +I D+ + A +A  H  L +VDN+  +P    PL LG DIV H+ TK++ G
Sbjct:   13 NEDATTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFSLLQSGDHVLLGDDVYGGNFRLFNKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKEHNLLTIVDNTFATPYCQNPLLLGTDIVAHNGTKYLGG 199          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METB_MYCTU (Cystathionine gamma-synthase OS=Mycobacterium tuberculosis GN=metB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.469e-36
Identity = 82/183 (44.81%), Postives = 110/183 (60.11%), Query Frame = 1
Query:  286 GALSTPLYQTATFKQPSATE-NGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            GA++ P+Y ++TF Q       G ++Y R+GNPTR ALE+             F+SGMAA   A+  +L  G+ +V  DD YGGT RL+ +V  +  V    V   DLD V +AI P T+L+WVE+PTNP   I DI  IAE+     A +LVDN+  SP L +PL LGAD+V+HS TK+I G
Sbjct:   30 GAVNVPIYASSTFAQDGVGGLRGGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTRWDVQYTPVRLADLDAVGAAITPRTRLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGG 212          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METB_MYCBO (Cystathionine gamma-synthase OS=Mycobacterium bovis GN=metB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.469e-36
Identity = 82/183 (44.81%), Postives = 110/183 (60.11%), Query Frame = 1
Query:  286 GALSTPLYQTATFKQPSATE-NGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            GA++ P+Y ++TF Q       G ++Y R+GNPTR ALE+             F+SGMAA   A+  +L  G+ +V  DD YGGT RL+ +V  +  V    V   DLD V +AI P T+L+WVE+PTNP   I DI  IAE+     A +LVDN+  SP L +PL LGAD+V+HS TK+I G
Sbjct:   30 GAVNVPIYASSTFAQDGVGGLRGGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTRWDVQYTPVRLADLDAVGAAITPRTRLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGG 212          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METB_BACSU (Cystathionine gamma-synthase OS=Bacillus subtilis GN=metB PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.728e-36
Identity = 82/197 (41.62%), Postives = 110/197 (55.84%), Query Frame = 1
Query:  241 VSTLLMNFSNEFDPY-GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            V T L    N  D   G +S P+Y +  ++     E+  +DY R+ NPTR  +E              F+SGMAA+  +  L  +G+E++   DLYGGT RL      K G+     +  D D + S I P TK V+VE+PTNP  Q  DI  IA +   HG LL+VDN+  +PVL RPLELGADIV+HSATK++ G
Sbjct:    5 VETKLAQIGNRSDEVTGTVSAPIYLSTAYRHRGIGESTGFDYVRTKNPTRQLVEDAIANLENGARGLAFSSGMAAIQTIMALFKSGDELIVSSDLYGGTYRLFENEWKKYGLTFHYDDFSDEDCLRSKITPNTKAVFVETPTNPLMQEADIEHIARITKEHGLLLIVDNTFYTPVLQRPLELGADIVIHSATKYLGG 201          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: CGL_BOVIN (Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.249e-35
Identity = 76/181 (41.99%), Postives = 110/181 (60.77%), Query Frame = 1
Query:  289 ALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            A+  P+  + TFKQ +  ++  ++Y+RSGNPTR+ LE              F SG+AA   +THLL  G++I+  DD+YGGT+R   +V  + G+ +  V+      + +AI P TKLVW+E+PTNP  ++ DI   A   H HG  +L+VDN+ MS    RPL LGADI M+SATK++ G
Sbjct:   36 AVVPPISLSTTFKQGAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYSLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVATEFGLKISFVDCSKPKLLEAAITPETKLVWIETPTNPSLKMIDIEACAHTVHKHGDIILVVDNTFMSAYFQRPLSLGADICMYSATKYMNG 216          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METB_MYCLE (Cystathionine gamma-synthase OS=Mycobacterium leprae GN=metB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.835e-35
Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:  238 GVSTLLMNFSNEFDPY-GALSTPLYQTATFKQPSATE-NGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            G++T  ++     DP  GA++ P+Y ++TF Q    E  G ++Y R+GNP R ALE+             F+SGMAA   A+  +L  G+ ++  DD+YGGT RL+ +V  +  V    V   DLD V +AI   T+L+WVE+PTNP   I DI  I E+   H   +LVDN+  SP L +PL LGAD+V+HS TK+I G
Sbjct:   13 GLATKAIHAGYRPDPATGAVNVPIYASSTFAQDGVGELRGGFEYARTGNPMRAALEASLATVEEGVFARAFSSGMAASDCALRVMLRPGDHVIIPDDVYGGTFRLIDKVFTQWNVDYTPVPLSDLDAVRAAITSRTRLIWVETPTNPLLSIADITSIGELGKKHSVKVLVDNTFASPALQQPLMLGADVVLHSTTKYIGG 212          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METC_COXBU (Cystathionine beta-lyase OS=Coxiella burnetii GN=metC PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.009e-35
Identity = 80/198 (40.40%), Postives = 118/198 (59.60%), Query Frame = 1
Query:  241 VSTLLMNFSNEFDPY-GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            + T +++   + DP  GA+ TP+Y  +T+ Q S   +  Y+Y+RS NPTR A E              F SGMAA A +  LL  G+ +V  DD+YGG+ RL   V  ++ G+    V+  D ++V  A+   TK++WVESP+NPR +I D+ KIAE+A     + + DN+  +P++ RPLELG DIV HSATK++ G
Sbjct:   11 IDTRVIHAGQKPDPLTGAVMTPIYTASTYAQKSPGVHQGYEYSRSQNPTRFAYERCVADLESGQHGFAFASGMAATATILELLQPGDHVVVMDDVYGGSYRLFENVRKRSAGLSFSFVDFTDENKVREAVTAKTKMLWVESPSNPRLKIVDLAKIAEIAKEKNIIAVADNTFATPIIQRPLELGFDIVTHSATKYLNG 208          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METB_HERAU (Probable cystathionine gamma-synthase (Fragment) OS=Herpetosiphon aurantiacus GN=metB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.542e-35
Identity = 71/181 (39.23%), Postives = 108/181 (59.67%), Query Frame = 1
Query:  286 GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            GA+  P+YQT+T+ Q    ++  Y+Y+R+ NPTR AL++             F SG+ A   +  +L  G+ ++ GDD+YGGT RL  RV  + G+    ++  D + V +AI P T+L+W+E+PTNP  ++  I  I  +A  HG   +VDN+  SP   RP+ LGAD+V+HS TK+I G
Sbjct:   21 GAVIVPIYQTSTYAQRGVGDHTGYEYSRTDNPTRTALQTCLAALEEAKHALVFASGLGASTTLMLMLKAGDHVICGDDVYGGTYRLFQRVMTEHGLSFDFIDMADPEAVRAAIKPNTRLIWLETPTNPLLKLAPIAAITRVAREHGIWTIVDNTFASPYNQRPITLGADMVLHSTTKYIGG 201          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: CGL_PIG (Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.545e-35
Identity = 75/181 (41.44%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  289 ALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            A+  P+  + TFKQ +  ++  ++Y+RSGNPT + LE              F SG+AA   +THLL  G +I++ DD+YGGT+R   +V  + G+ +  V+      + +AI P TKLVW+E+PTNP  ++ DI   A++ H HG  +L+VDN+ MS    RPL LGADI M+SATK++ G
Sbjct:   36 AVVPPISLSTTFKQEAPGQHSGFEYSRSGNPTXNCLEKAVAVLDGAKYSLAFASGLAATVTITHLLKAGXQIISMDDVYGGTNRYFRQVAAEFGLKISFVDCSKSKLLEAAITPETKLVWIETPTNPILKMIDIEACAQIVHKHGDIILVVDNTFMSAYFQRPLALGADICMYSATKYMNG 216          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: CGL_MACFA (Cystathionine gamma-lyase OS=Macaca fascicularis GN=CTH PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.457e-34
Identity = 74/173 (42.77%), Postives = 107/173 (61.85%), Query Frame = 1
Query:  313 TATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            + TFKQ +  ++  ++Y+RSGNPTR+ LE              F SG+AA   +THLL  G++I+  DD+YGGT+R   +V  + G+ +  V+   +  + +AI P TKLVW+E+PTNP  ++ DI   A + H  G  +L+VDN+ MSP   RPL LGADI M SATK++ G
Sbjct:   44 STTFKQAAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPVLKMIDIEACAHIVHKRGDIILVVDNTFMSPYFQRPLALGADICMCSATKYMNG 216          
The following BLAST results are available for this feature:
BLAST of CK936719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
METB_HELPJ1.192e-3640.64Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
METB_MYCTU3.469e-3644.81Cystathionine gamma-synthase OS=Mycobacterium tube... [more]
METB_MYCBO3.469e-3644.81Cystathionine gamma-synthase OS=Mycobacterium bovi... [more]
METB_BACSU7.728e-3641.62Cystathionine gamma-synthase OS=Bacillus subtilis ... [more]
CGL_BOVIN2.249e-3541.99Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=... [more]
METB_MYCLE3.835e-3541.50Cystathionine gamma-synthase OS=Mycobacterium lepr... [more]
METC_COXBU5.009e-3540.40Cystathionine beta-lyase OS=Coxiella burnetii GN=m... [more]
METB_HERAU6.542e-3539.23Probable cystathionine gamma-synthase (Fragment) O... [more]
CGL_PIG8.545e-3541.44Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=... [more]
CGL_MACFA1.457e-3442.77Cystathionine gamma-lyase OS=Macaca fascicularis G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004519_A01 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936719 ID=CK936719; Name=CK936719; organism=Citrus sinensis; type=EST; length=829bp
GGGGATCTCAAGCCTTTCGTCTCCGATGCCTACACTGATCTCACCAACAG
TGGTTCTTCAATACCTTTAAATTCCCCAACAAGCTTTGGGTTTAGTAAAA
GGCGGATAATATTTGCGAAGGAATTAAAACTGAATTGCTCGATAGACAGG
GAAAAGGAAATTGATGTCAGCACTTCAGCTCTTGTGGATGATGTAGCTGA
GTGTTTGGAAGAAGAAATGAGCGTGGAGGAGGAGCCTGGTGTTTCTACAT
TATTGATGAATTTTTCTAATGAGTTTGATCCTTATGGTGCGTTGAGCACT
CCGCTTTATCAGACTGCGACATTTAAGCAACCTTCTGCGACAGAGAATGG
CGCCTATGATTATACCAGAAGTGGAAATCCTACACGAGATGCCTTAGAAA
GCCTCCTTGCAAAGCTTGATAAGGCCGACCAAGCGCTTTGCTTCACCAGC
GGAATGGCTGCTTTGGCTGCTGTTACTCATCTTCTTGGAACTGGTGAAGA
AATTGTTGCTGGAGATGACCTGTATGGTGGTACTGATCGTTTGTTATCAC
GAGTAACTCCTAAAACTGGGGTTGTAGTGAAGCGTGTGAATACATGCGAT
CTAGATGAGGTTGCCTCTGCTATTGGTCCTTGGACAAAGCTTGTCTGGGT
GGAAAGTCCAACCAACCCTCGACAACAAATTTGTGACATTCGTAAAATTG
CCGAAATGGCTCATGCACATGGTGCTCTTCTGCTAGTGGATAACAGCATT
ATGTCCCCTGTATTATCTCGACCTCTGGAACTCGGAGCAGACATTGTGAT
GCACTCAGCTACTAAATTTATAGCTGGAC
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