CK936719

Overview
NameCK936719
Unique NameCK936719
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METB_HAEIN (Cystathionine gamma-synthase OS=Haemophilus influenzae GN=metB PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.904e-34
Identity = 80/199 (40.20%), Postives = 117/199 (58.79%), Query Frame = 1
Query:  241 VSTLLMNFSNEFDPY-GALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            + TLL    N  D   GA+S P++ +  +      E+  +DYTR+ NPTR  LE              F+SGMAA+  +  L    +E +   D+YGGT RLL   + K    VK V  NT     + +AI P TK +++E+P+NP  + CD+ +IA++A  H  +L+VDN+ ++PVLSRPL+LGAD+V+HS TK+IAG
Sbjct:    7 IDTLLAQAGNRSDERTGAVSAPIFLSTAYGHCGIGESTGFDYTRTKNPTRTVLEETIAKLENGDRGFAFSSGMAAIQVLMTLFTAPDEWIVSSDVYGGTYRLLD-FSYKNNNSVKPVYVNTASASAIEAAINPNTKAIFIETPSNPLMEECDVVEIAKLAKKHNLMLIVDNTFLTPVLSRPLDLGADVVIHSGTKYIAG 204          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: CGL_RAT (Cystathionine gamma-lyase OS=Rattus norvegicus GN=Cth PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.904e-34
Identity = 75/181 (41.44%), Postives = 108/181 (59.67%), Query Frame = 1
Query:  289 ALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            A+  P+    TFKQ S  ++  + Y+RSGNPTR+ LE              F  G+AA   +THLL  G+E++  D++YGGT+R   RV  + G+ +  V+      + +AI P TKLVW+E+PTNP  ++ DI+  A++ H H   +L+VDN+ MS    RPL LGADI M SATK++ G
Sbjct:   35 AVVLPISLATTFKQDSPGQSSGFVYSRSGNPTRNCLEKAVAALDGAKHCLTFARGLAATTTITHLLKAGDEVICMDEVYGGTNRYFRRVASEFGLKISFVDCSKTKLLEAAITPQTKLVWIETPTNPTLKLADIKACAQIVHKHKDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNG 215          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: CGL_MOUSE (Cystathionine gamma-lyase OS=Mus musculus GN=Cth PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.904e-34
Identity = 76/181 (41.99%), Postives = 108/181 (59.67%), Query Frame = 1
Query:  289 ALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            A+  P+    TFKQ    ++  ++Y+RSGNPTR+ LE              F SG+AA   +THLL  G+EI+  D++YGGT+R   RV  + G+ +  V+      + +AI P TKLVW+E+PTNP  ++ DI   A++ H  G  +L+VDN+ MS    RPL LGADI M SATK++ G
Sbjct:   35 AVVLPISLATTFKQDFPGQSSGFEYSRSGNPTRNCLEKAVAALDGAKHSLAFASGLAATITITHLLKAGDEIICMDEVYGGTNRYFRRVASEFGLKISFVDCSKTKLLEAAITPQTKLVWIETPTNPTLKLADIGACAQIVHKRGDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNG 215          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: CGL2_CAEEL (Putative cystathionine gamma-lyase 2 OS=Caenorhabditis elegans GN=cth-2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.105e-33
Identity = 74/179 (41.34%), Postives = 109/179 (60.89%), Query Frame = 1
Query:  301 PLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG--ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            P+  ++T+KQ +  E   +DY+R+GNPTRD L+              F+SG+AA +A+ +LL  G+ IV  DD+YGGT R + RV  P  G+ V  V+  D+  +  AI P TK+VW ESP+NP  ++ DI  + + A       +++VDN+ MSP   RP+ LGAD+V+HS TK+I G
Sbjct:   29 PISLSSTYKQDNPGEPKGHDYSRAGNPTRDVLQKNLAALEDAKHCQVFSSGLAATSAIINLLKYGDHIVCSDDVYGGTQRYIRRVAVPNHGLEVDSVDLTDVQNLEKAIKPNTKMVWFESPSNPLLKVVDIAAVVQTAKKANPEIVVVVDNTFMSPYFQRPISLGADVVVHSITKYING 207          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: MEGL_PSEPU (Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.360e-31
Identity = 79/210 (37.62%), Postives = 119/210 (56.67%), Query Frame = 1
Query:  235 PGVSTLLMNFSNEFDPY---GALSTPLYQTATFKQPS--------ATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            PG +T  ++    +DP    GAL  P+YQTATF  P+        A E   + Y+R  NPT + LE+               SGM A+ +    LL  G+E++ G+ LYG T   L     + GV ++ V+  DL  + +A+ P T++++ ESP NP   + DI  +A++A  HGA ++VDN+  +P L RPLELGAD+V+HSATK+++G
Sbjct:    8 PGFATRAIHHG--YDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSG 215          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: CYS3_YEAST (Cystathionine gamma-lyase OS=Saccharomyces cerevisiae GN=CYS3 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.388e-31
Identity = 77/200 (38.50%), Postives = 112/200 (56.00%), Query Frame = 1
Query:  244 STLLMNFSNEFDPYGALSTPLYQTATFKQPS-ATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGA----LLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            +T  ++     D +G++  P+  + TFKQ S A   G Y+Y+RS NP R+ LE              F+SG A  A +   L  G   V+  D+YGGT R  ++V    GV     N   L+++   I   TKLVW+E+PTNP  ++ DI+K+A++   H A    +L+VDN+ +SP +S PL  GADIV+HSATK+I G
Sbjct:   10 ATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGSATTATILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL-LNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYING 208          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METB_ECOLI (Cystathionine gamma-synthase OS=Escherichia coli (strain K12) GN=metB PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.944e-27
Identity = 69/188 (36.70%), Postives = 106/188 (56.38%), Query Frame = 1
Query:  268 NEFDPYGALSTPLYQTATFKQPSATENGAYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAALAAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            N+ + YG +  P++ ++T+      E  A+DY+R GNPTRD ++                +GM+A+  VT + L  G+ +VA  D YGG+ RL   +  +    V  V+  D   + +A+    KLV VESP+NP  ++ DI KI  +A   GA+ +VDN+ +SP L  PL LGAD+V+HS TK++ G
Sbjct:   15 NDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNG 202          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: METZ_PSEAE (O-succinylhomoserine sulfhydrylase OS=Pseudomonas aeruginosa GN=metZ PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.974e-23
Identity = 71/203 (34.98%), Postives = 102/203 (50.25%), Query Frame = 1
Query:  247 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGAYD--------YTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAA-LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 828
            TL +       P G     L+ T+++   +A +  A          Y+R  NPT    E                SGM+A LA V  L  +G+ ++    ++G T  L  +   + G+ V      DL    +A  P TKL +VESP+NP  ++ DI  +AE+AHA GALL VDN   +P L +PL+LGAD+V+HSATK+I G
Sbjct:   21 TLAVRAGQRRTPEGEHGEALFTTSSYVFRTAADAAARFAGEVPGNVYSRYTNPTVRTFEERIAALEGAEQAVATASGMSAILALVMSLCSSGDHVLVSRSVFGSTISLFDKYFKRFGIQVDYPPLSDLAAWEAACKPNTKLFFVESPSNPLAELVDIAALAEIAHAKGALLAVDNCFCTPALQQPLKLGADVVIHSATKYIDG 223          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: CYSD_SCHPO (O-acetylhomoserine (thiol)-lyase OS=Schizosaccharomyces pombe GN=SPBC428.11 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.745e-23
Identity = 71/188 (37.77%), Postives = 96/188 (51.06%), Query Frame = 1
Query:  295 STPLYQTATFKQPSATENG--------AYDYTRSGNPTRDALESXXXXXXXXXXXXCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAG 828
            + P+Y T ++        G         Y Y+R  NPT D  E               +SG +AL  A+T L   G+ IV+   LYGGT  L     P+ G+  K VN  D +++A+ I   TK V+VES  NP   + D  +IAE+AHA G  L+VDN+      L RP++ GADIV HSATK+I G
Sbjct:   27 AVPIYATTSYVFRDCDHGGRLFGLQEPGYIYSRMMNPTADVFEKRIAALEHGAAAIATSSGTSALFMALTTLAKAGDNIVSTSYLYGGTYNLFKVTLPRLGITTKFVNGDDPNDLAAQIDENTKAVYVESIGNPMYNVPDFERIAEVAHAAGVPLMVDNTFGGGGYLVRPIDHGADIVTHSATKWIGG 214          
BLAST of CK936719 vs. ExPASy Swiss-Prot
Match: STR3_YEAST (Cystathionine beta-lyase OS=Saccharomyces cerevisiae GN=STR3 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.377e-21
Identity = 73/212 (34.43%), Postives = 110/212 (51.89%), Query Frame = 1
Query:  241 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGA-YDYTRSGNPTRDALESXXXXXXXXXXXXCF--TSGMAALAAVTH----LLGTGEE---IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKL--VWVESPTNPRQQICDIRKIAEMAH--AHGALLLVDNSIMSPVLSRPLEL--GADIVMHSATKFIAG 828
            + T+++N  ++ D + A   P+Y + TFK     E+   YDY+RSGNPTR  L+                 +SGM AL  +      L GT      I+AGDDLYGGT RLL+    ++  V   V+T D ++  +      K+  V +ESPTNP  ++ DI +I       +    ++VDN++MS +   PL+L  G D+V  SATK++ G
Sbjct:    6 LDTVVVNTGSQNDQHSASVPPVYLSTTFKVDLNNEDAQNYDYSRSGNPTRSVLQHQIGKLYRVPQENVLAVSSGMTALDVILRGLVLLNGTDNHTPTIIAGDDLYGGTQRLLNFFKQQSHAVSVHVDTSDFEKFKTVFQSLDKVDCVLLESPTNPLCKVVDIPRILRFVKCISPDTTVVVDNTMMSGLNCNPLQLNPGCDVVYESATKYLNG 217          
The following BLAST results are available for this feature:
BLAST of CK936719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
METB_HAEIN1.904e-3440.20Cystathionine gamma-synthase OS=Haemophilus influe... [more]
CGL_RAT1.904e-3441.44Cystathionine gamma-lyase OS=Rattus norvegicus GN=... [more]
CGL_MOUSE1.904e-3441.99Cystathionine gamma-lyase OS=Mus musculus GN=Cth P... [more]
CGL2_CAEEL2.105e-3341.34Putative cystathionine gamma-lyase 2 OS=Caenorhabd... [more]
MEGL_PSEPU3.360e-3137.62Methionine gamma-lyase OS=Pseudomonas putida GN=md... [more]
CYS3_YEAST4.388e-3138.50Cystathionine gamma-lyase OS=Saccharomyces cerevis... [more]
METB_ECOLI2.944e-2736.70Cystathionine gamma-synthase OS=Escherichia coli (... [more]
METZ_PSEAE1.974e-2334.98O-succinylhomoserine sulfhydrylase OS=Pseudomonas ... [more]
CYSD_SCHPO5.745e-2337.77O-acetylhomoserine (thiol)-lyase OS=Schizosaccharo... [more]
STR3_YEAST5.377e-2134.43Cystathionine beta-lyase OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004519_A01 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936719 ID=CK936719; Name=CK936719; organism=Citrus sinensis; type=EST; length=829bp
GGGGATCTCAAGCCTTTCGTCTCCGATGCCTACACTGATCTCACCAACAG
TGGTTCTTCAATACCTTTAAATTCCCCAACAAGCTTTGGGTTTAGTAAAA
GGCGGATAATATTTGCGAAGGAATTAAAACTGAATTGCTCGATAGACAGG
GAAAAGGAAATTGATGTCAGCACTTCAGCTCTTGTGGATGATGTAGCTGA
GTGTTTGGAAGAAGAAATGAGCGTGGAGGAGGAGCCTGGTGTTTCTACAT
TATTGATGAATTTTTCTAATGAGTTTGATCCTTATGGTGCGTTGAGCACT
CCGCTTTATCAGACTGCGACATTTAAGCAACCTTCTGCGACAGAGAATGG
CGCCTATGATTATACCAGAAGTGGAAATCCTACACGAGATGCCTTAGAAA
GCCTCCTTGCAAAGCTTGATAAGGCCGACCAAGCGCTTTGCTTCACCAGC
GGAATGGCTGCTTTGGCTGCTGTTACTCATCTTCTTGGAACTGGTGAAGA
AATTGTTGCTGGAGATGACCTGTATGGTGGTACTGATCGTTTGTTATCAC
GAGTAACTCCTAAAACTGGGGTTGTAGTGAAGCGTGTGAATACATGCGAT
CTAGATGAGGTTGCCTCTGCTATTGGTCCTTGGACAAAGCTTGTCTGGGT
GGAAAGTCCAACCAACCCTCGACAACAAATTTGTGACATTCGTAAAATTG
CCGAAATGGCTCATGCACATGGTGCTCTTCTGCTAGTGGATAACAGCATT
ATGTCCCCTGTATTATCTCGACCTCTGGAACTCGGAGCAGACATTGTGAT
GCACTCAGCTACTAAATTTATAGCTGGAC
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