CN186276

Overview
NameCN186276
Unique NameCN186276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_DROYA (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila yakuba GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.150e-51
Identity = 105/252 (41.67%), Postives = 159/252 (63.10%), Query Frame = 1
Query:  103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843
            MA +DLT+     LDRHL FPLLEFL  +++Y  +++L+  +E +NKTNM+DY MD  K L  ++++P+++V+R+ EV+A LK L+   API+     L+N  S +D +       +  L   Y    + +E+ Y+ AK+ +ECGNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D      S +  +Q R WL+HWS+ +FFNH  GR LII++F ++  YLNAIQT
Sbjct:    1 MANFDLTRINCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMPEELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKT-----FVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLYFCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDSAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQT 245          
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_DROMO (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila mojavensis GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.150e-51
Identity = 105/252 (41.67%), Postives = 159/252 (63.10%), Query Frame = 1
Query:  103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843
            MA +DLT+     LDRHL FPLLEFL  +++Y  +++L+  +E +NKTNM+DY MD  K L  ++++P+++V+R+ EV+A LK L+   API+     L+N  S +D +       +  L   Y    + +E+ Y+ AK+ +ECGNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D      S +  +Q R WL+HWS+ +FFNH  GR LII++F ++  YLNAIQT
Sbjct:    1 MAQFDLTRINCQYLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMPEELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKT-----FVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLYFCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDSAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQT 245          
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_DROER (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila erecta GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.150e-51
Identity = 105/252 (41.67%), Postives = 159/252 (63.10%), Query Frame = 1
Query:  103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843
            MA +DLT+     LDRHL FPLLEFL  +++Y  +++L+  +E +NKTNM+DY MD  K L  ++++P+++V+R+ EV+A LK L+   API+     L+N  S +D +       +  L   Y    + +E+ Y+ AK+ +ECGNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D      S +  +Q R WL+HWS+ +FFNH  GR LII++F ++  YLNAIQT
Sbjct:    1 MANFDLTRINCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMPEELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKT-----FVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLYFCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDSAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQT 245          
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_DROAN (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila ananassae GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.150e-51
Identity = 105/252 (41.67%), Postives = 159/252 (63.10%), Query Frame = 1
Query:  103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843
            MA +DLT+     LDRHL FPLLEFL  +++Y  +++L+  +E +NKTNM+DY MD  K L  ++++P+++V+R+ EV+A LK L+   API+     L+N  S +D +       +  L   Y    + +E+ Y+ AK+ +ECGNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D      S +  +Q R WL+HWS+ +FFNH  GR LII++F ++  YLNAIQT
Sbjct:    1 MAQFDLTRINCQYLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMPEELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKT-----FVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLYFCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDSAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQT 245          
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_DROPS (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.726e-51
Identity = 105/252 (41.67%), Postives = 158/252 (62.70%), Query Frame = 1
Query:  103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843
            MA +DLT+     LDRHL FPLLEFL  +++Y  +++L+  +E +NKTNM+DY MD  K L  ++++P ++V+R+ EV+A LK L+   API+     L+N  S +D +       +  L   Y    + +E+ Y+ AK+ +ECGNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D      S +  +Q R WL+HWS+ +FFNH  GR LII++F ++  YLNAIQT
Sbjct:    1 MANFDLTRINCQYLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMPDELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKT-----FVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLYFCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDSAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQT 245          
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_DROVI (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila virilis GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.785e-51
Identity = 105/252 (41.67%), Postives = 158/252 (62.70%), Query Frame = 1
Query:  103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843
            MA +DLT+     LDRHL FPLLEFL  +++Y  +++L+  +E +NKTNM+DY MD  K L  ++++P ++V+R+ EV+A LK L+   API+     L+N  S +D +       +  L   Y    + +E+ Y+ AK+ +ECGNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D      S +  +Q R WL+HWS+ +FFNH  GR LII++F ++  YLNAIQT
Sbjct:    1 MAQFDLTRINCQYLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMPDELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKT-----FVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLYFCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDSAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQT 245          
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_DROPE (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila persimilis GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.785e-51
Identity = 105/252 (41.67%), Postives = 158/252 (62.70%), Query Frame = 1
Query:  103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843
            MA +DLT+     LDRHL FPLLEFL  +++Y  +++L+  +E +NKTNM+DY MD  K L  ++++P ++V+R+ EV+A LK L+   API+     L+N  S +D +       +  L   Y    + +E+ Y+ AK+ +ECGNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D      S +  +Q R WL+HWS+ +FFNH  GR LII++F ++  YLNAIQT
Sbjct:    1 MANFDLTRINCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMPDELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKT-----FVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLYFCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDSAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQT 245          
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_MAGGR (Eukaryotic translation initiation factor 3 subunit E OS=Magnaporthe grisea GN=INT6 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.498e-50
Identity = 98/260 (37.69%), Postives = 158/260 (60.77%), Query Frame = 1
Query:  100 TMATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDE-----------QILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLFHQDKYLNAIQTN 846
            ++A +DL  ++  NLDRHL+FPLL+     Q Y +E           ++ K+K ELL KTNM DY  ++H  L  T++ P +  E+R +V+ +L+  E+  + +   L       +LR+ D+  NL+ L   + +  + + ALY +  FQ+ CGNY  AA+ LYQ+R L T++++  +A WGK+A+EIL  NW+ A+EEL +++E +D  + F +PL Q+Q R WL HW+LF  FN +N R  ++++F    Y+N IQT+
Sbjct:   11 SLAQFDLLPKLVKNLDRHLIFPLLD-AASAQYYDEETNEPRDVDKAREMTKAKFELLKKTNMTDYVANLHCELEGTDEPPAEYAEKRQKVIKQLQDFEDSVSKLRDLLDREEVISNLRS-DKVANLEFLKKEHDVTIEMVTALYDFGNFQYSCGNYPAAAELLYQFRVLSTDNDKVSAATWGKLASEILSGNWEGAMEELKKVREDIDS-RLFNNPLAQLQHRTWLTHWALFPLFNDENSREALLEMFFSPNYINTIQTS 267          
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EI3E2_DROWI (Eukaryotic translation initiation factor 3 subunit E-2 OS=Drosophila willistoni GN=eIF3-S6-2 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.957e-50
Identity = 106/256 (41.41%), Postives = 161/256 (62.89%), Query Frame = 1
Query:  103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQD----LRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843
            MA +DLT+     LDRHL FPLLEFL  +++Y  +++L+  +E +NKTNM+DY MD  K L  ++++P+++V+R+ EV+A LK L+   API+     L+N  S +D    + A  + YN +M         + + + Y+ AK+ +ECGNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D      S +  +Q R WL+HWS+ +FFNH  GR LII++F ++  YLNAIQT
Sbjct:    1 MAQFDLTRINCQYLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMPEELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKTFVNALQKDYNFKM---------EHLYSAYKLAKYLYECGNYQESTSYLYFCLIVMAPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDSAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQT 245          
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_DROGR (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila grimshawi GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.360e-50
Identity = 104/252 (41.27%), Postives = 157/252 (62.30%), Query Frame = 1
Query:  103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843
            MA +DLT+     LDRHL FPLLEFL  +++Y  + +L+  ++ +NKTNM+DY MD  K L  ++D+P ++V+R+ +V+A LK L+   API+     L+N  S +D +       +  L   Y    + +E+ Y+ AK+ +ECGNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D      S +  +Q R WL+HWS+ +FFNH  GR LII++F ++  YLNAIQT
Sbjct:    1 MAQFDLTRINCQYLDRHLTFPLLEFLCGKEIYNQQDLLEYILDTVNKTNMIDYTMDTRKRLNLSQDMPDELVQRKSDVLATLKQLQNEVAPIMKATDILKNGESMKDSKT-----FVNALQKDYNFKVEHLESAYKLAKYLYECGNYQESTSYLYFCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDSAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQT 245          
The following BLAST results are available for this feature:
BLAST of CN186276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
EIF3E_DROYA5.150e-5141.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROMO5.150e-5141.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROER5.150e-5141.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROAN5.150e-5141.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROPS6.726e-5141.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROVI8.785e-5141.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROPE8.785e-5141.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_MAGGR1.498e-5037.69Eukaryotic translation initiation factor 3 subunit... [more]
EI3E2_DROWI1.957e-5041.41Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROGR4.360e-5041.27Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002K09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002K09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186276 ID=CN186276; Name=CN186276; organism=Citrus sinensis; type=EST; length=851bp
CAAACCTAAACACTAACGCTCGTCCTCAGTTTGCTCTTCGTCTACAGAAG
AACAGCAGCAGCAGACGCCGCTGCCGCCGAGGAACGAAATTTCAACGCGA
CAATGGCGACGTACGATTTGACACAGAGAATCGCGCCGAATCTGGACCGG
CATCTGGTGTTTCCGCTGCTGGAGTTTCTCCAAGAGCGGCAGATGTACCC
GGACGAGCAGATTCTGAAATCGAAGATAGAGCTCTTGAACAAGACGAACA
TGGTCGACTACGCGATGGACATCCACAAGAGCCTCTACCACACCGAAGAC
GTCCCGCAGGATATGGTCGAGCGGAGGGTCGAGGTCGTCGCTCGTTTGAA
GGCCCTGGAGGAGCGCGCCGCCCCGATCGTTTCGTTCTTGCAGAACCCTA
ACTCCTTTCAAGATTTGAGAGCTAATGACCAGCACTACAATTTGCAGATG
CTTAACGACCGTTACCAGATTGGCCCGGATCAGATCGAGGCGCTTTATCA
GTATGCCAAATTTCAGTTTGAATGTGGGAACTACTCTGGGGCTGCTGACT
ATCTGTACCAGTACAGGGCCTTGTGCACAAACAGTGAAAGGAGGCTGAGT
GCATTATGGGGAAAAATGGCGGCTGAGATATTGATGCAGAATTGGGATAT
TGCTCTTGAAGAACTTAATCAATTAAAGGAAAAAGTTGATGACCCAAAGA
GTTTCACTTCACCTTTAAATCAGATGCAGAGTAGGATATGGCTAATGCAT
TGGAGTCTCTTCATCTTTTTCAATCATGATAATGGGAGAACACTGATCAT
TGACTTGTTTCATCAGGATAAGTATCTAAATGCCATTCAAACCAATGCTC
C
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