CN186276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_RAT (Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus GN=Eif3e PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.450e-70 Identity = 131/250 (52.40%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRA-NDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843 MA YDLT RIA LDRHLVFPLLEFL +++Y ++++L+ K++LL+ TNMVD+AMD++K+LY ++D+P + E+R VVA+LK L+ PIV ++P + + +++ D L D++ + ++ LY+YAKFQ+ECGNYSGAA+YLY +R L ++R LS+LWGK+A+EILMQNWD A+E+L +LKE +D+ S +SPL +Q R WL+HWSLF+FFNH GR IIDLF +Q +YLNAIQT Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDN-NSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQT 248
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_PONAB (Eukaryotic translation initiation factor 3 subunit E OS=Pongo abelii GN=EIF3E PE=2 SV=2) HSP 1 Score: 263.848 bits (673), Expect = 8.450e-70 Identity = 131/250 (52.40%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRA-NDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843 MA YDLT RIA LDRHLVFPLLEFL +++Y ++++L+ K++LL+ TNMVD+AMD++K+LY ++D+P + E+R VVA+LK L+ PIV ++P + + +++ D L D++ + ++ LY+YAKFQ+ECGNYSGAA+YLY +R L ++R LS+LWGK+A+EILMQNWD A+E+L +LKE +D+ S +SPL +Q R WL+HWSLF+FFNH GR IIDLF +Q +YLNAIQT Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDN-NSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQT 248
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_MOUSE (Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus GN=Eif3e PE=1 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.450e-70 Identity = 131/250 (52.40%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRA-NDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843 MA YDLT RIA LDRHLVFPLLEFL +++Y ++++L+ K++LL+ TNMVD+AMD++K+LY ++D+P + E+R VVA+LK L+ PIV ++P + + +++ D L D++ + ++ LY+YAKFQ+ECGNYSGAA+YLY +R L ++R LS+LWGK+A+EILMQNWD A+E+L +LKE +D+ S +SPL +Q R WL+HWSLF+FFNH GR IIDLF +Q +YLNAIQT Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDN-NSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQT 248
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_MACFA (Eukaryotic translation initiation factor 3 subunit E OS=Macaca fascicularis GN=EIF3E PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.450e-70 Identity = 131/250 (52.40%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRA-NDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843 MA YDLT RIA LDRHLVFPLLEFL +++Y ++++L+ K++LL+ TNMVD+AMD++K+LY ++D+P + E+R VVA+LK L+ PIV ++P + + +++ D L D++ + ++ LY+YAKFQ+ECGNYSGAA+YLY +R L ++R LS+LWGK+A+EILMQNWD A+E+L +LKE +D+ S +SPL +Q R WL+HWSLF+FFNH GR IIDLF +Q +YLNAIQT Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDN-NSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQT 248
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_HUMAN (Eukaryotic translation initiation factor 3 subunit E OS=Homo sapiens GN=EIF3E PE=1 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.450e-70 Identity = 131/250 (52.40%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRA-NDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843 MA YDLT RIA LDRHLVFPLLEFL +++Y ++++L+ K++LL+ TNMVD+AMD++K+LY ++D+P + E+R VVA+LK L+ PIV ++P + + +++ D L D++ + ++ LY+YAKFQ+ECGNYSGAA+YLY +R L ++R LS+LWGK+A+EILMQNWD A+E+L +LKE +D+ S +SPL +Q R WL+HWSLF+FFNH GR IIDLF +Q +YLNAIQT Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDN-NSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQT 248
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_BOVIN (Eukaryotic translation initiation factor 3 subunit E OS=Bos taurus GN=EIF3E PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.450e-70 Identity = 131/250 (52.40%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRA-NDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843 MA YDLT RIA LDRHLVFPLLEFL +++Y ++++L+ K++LL+ TNMVD+AMD++K+LY ++D+P + E+R VVA+LK L+ PIV ++P + + +++ D L D++ + ++ LY+YAKFQ+ECGNYSGAA+YLY +R L ++R LS+LWGK+A+EILMQNWD A+E+L +LKE +D+ S +SPL +Q R WL+HWSLF+FFNH GR IIDLF +Q +YLNAIQT Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDN-NSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQT 248
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EI3EB_DANRE (Eukaryotic translation initiation factor 3 subunit E-B OS=Danio rerio GN=eif3eb PE=2 SV=2) HSP 1 Score: 262.692 bits (670), Expect = 1.882e-69 Identity = 125/250 (50.00%), Postives = 187/250 (74.80%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRA-NDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843 MA YDLT RIA LDRHLVFPLLEFL +++Y ++++L+ K++LL++TNMVD+AMD++K+LY +++P + ++R VVA+LK L+ PIV ++P + + +++ D + L D++ + ++ LY+YAKFQ+ECGNYSGAA+YLY +R L +++R LS+LWGK+A+EILMQNW+ A+E+L +L+E +D+ + +SPL +Q R WL+HWSLF+FFNH GR II+LF +Q +YLNAIQT Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSETNMVDFAMDVYKNLYPDKEIPHSLRDKRTTVVAQLKQLQSETEPIVKMFEDPETQRQMQSTRDGRMLFEYLADKHSFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPSTDRNALSSLWGKLASEILMQNWEAAMEDLTRLRETIDN-NTVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIELFLYQPQYLNAIQT 249
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_NEMVE (Eukaryotic translation initiation factor 3 subunit E OS=Nematostella vectensis GN=v1g163572 PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 9.342e-69 Identity = 130/250 (52.00%), Postives = 177/250 (70.80%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPN-SFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSE-RRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDL-FHQDKYLNAIQT 843 MA +DLT ++ LDRHLVFPLLEFL +++Y + ++LK K++LL+ TNMVD+AMD++K LY E+VP +VE+RVEVV LK L+ + PI++ +P + Q D + L + I P+ ++ LY++AKFQ+ECGNYSGAA+YLY YRAL + L+ALWGK+A+EILMQNWD ALE+LN+LK+ ++ S L +Q R WL+HWSLF+FFNH GR LIIDL +Q +YLNAIQT Sbjct: 1 MAEHDLTSKMGCFLDRHLVFPLLEFLSVKEIYDEHELLKGKLDLLSNTNMVDFAMDVYKGLYPDEEVPTSLVEKRVEVVKELKDLQAQTEPIINCFSDPEFTAQVQSTRDGRQLFEYLERNHDIKPEMLDVLYKFAKFQYECGNYSGAAEYLYFYRALAPGGDTNSLNALWGKLASEILMQNWDTALEDLNRLKDVIESNTS-AGTLQLLQERTWLIHWSLFVFFNHPKGRDLIIDLILYQPQYLNAIQT 249
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EI3EA_XENLA (Eukaryotic translation initiation factor 3 subunit E-A OS=Xenopus laevis GN=eif3e-A PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 9.342e-69 Identity = 127/250 (50.80%), Postives = 184/250 (73.60%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRA-NDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843 MA YDLT +IA LDRHLVFPLLEFL +++Y ++++L K++LL+ TNMVD+AMD++K+LY +++P + E+R VVA+LK L+ PIV ++P + + +++ D L +++ + ++ LY+YAKFQ+ECGNYSGAA+YLY +R L +++R LS+LWGK+A+EILMQNWD A+E+L +LKE +D+ + +SPL +Q R WL+HWSLF+FFNH GR IIDLF +Q +YLNAIQT Sbjct: 1 MADYDLTTKIAQFLDRHLVFPLLEFLSVKEIYNEKELLHGKLDLLSDTNMVDFAMDVYKNLYADKEIPLALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDHLAEKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPSTDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDN-NTVSSPLQSLQHRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQT 249
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_XENTR (Eukaryotic translation initiation factor 3 subunit E OS=Xenopus tropicalis GN=eif3e PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.220e-68 Identity = 126/250 (50.40%), Postives = 184/250 (73.60%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRA-NDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQT 843 MA YDLT +IA LDRHLVFPLLEFL +++Y ++++ + K++LL+ TNMVD+AMD++K+LY +++P + E+R VVA+LK L+ PIV ++P + + +++ D L +++ + ++ LY+YAKFQ+ECGNYSGAA+YLY +R L +++R LS+LWGK+A+EILMQNWD A+E+L +LKE +D+ + +SPL +Q R WL+HWSLF+FFNH GR IIDLF +Q +YLNAIQT Sbjct: 1 MAEYDLTTKIAHFLDRHLVFPLLEFLSVKEIYNEKELFQGKLDLLSDTNMVDFAMDVYKNLYADKEIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDHLAEKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPSTDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDN-NTVSSPLQSLQHRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQT 249 The following BLAST results are available for this feature:
BLAST of CN186276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186276 ID=CN186276; Name=CN186276; organism=Citrus sinensis; type=EST; length=851bpback to top |