CN186276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_BRUMA (Eukaryotic translation initiation factor 3 subunit E OS=Brugia malayi GN=Bm1_11985 PE=3 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 1.229e-44 Identity = 94/250 (37.60%), Postives = 158/250 (63.20%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNP--NSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALC-TNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQ 840 MA YDLT+R+AP D HLV PLLEF++ R +Y + ++K +L KTNM+D ++ Y +VP+++ +R+VE++++ + L+ + P+V L++ + D R + L+ + + + + +++L++YAKFQ+ECGNYS A+ L YR + + LSAL+GK+A+EIL+Q W A ++L +L+ +D F + L +Q R WLMHW+LF++FN+ GR I++++ +Q YLN IQ Sbjct: 1 MAEYDLTKRMAPFFDLHLVIPLLEFIEPRSIYDHDSLIKVHRRVLLKTNMIDSVIE----TYPEGEVPKELEQRKVEILSQREKLKVKVDPVVEILESEPVKAMMDSRELTNNRILEYVTANHGLTEEMLDSLFRYAKFQYECGNYSAASLCLDYYRNIVPQQNPNYLSALYGKLASEILLQEWTHAKDDLTKLRTYIDF-NPFDTELESVQQRAWLMHWALFVYFNYPKGRDEIVEMYLNQQPYLNTIQ 245
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_CAEEL (Eukaryotic translation initiation factor 3 subunit E OS=Caenorhabditis elegans GN=eif-3.E PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.454e-42 Identity = 90/256 (35.16%), Postives = 158/256 (61.72%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYN-----LQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSE-RRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQTNA 849 M+T+DLTQR+AP LD HL+ PLLEF++ R +Y ++ + + +LL KTNM+D ++ Y+ + +P + ++ +++ L+ + +V+ L+ P +++ N++ + L+ L + D ++ L++Y+KF +ECGNY+ A+ LY YR L ++ L+AL+GK+A+EIL+Q W+ A ++L +L+ + D F + + R WLMHW+LF+++N+ GR II++F +Q YLNAIQ A Sbjct: 1 MSTFDLTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVIE----TYNGKPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIP-EVKEMMDNNRERDGNVRILEHLTQNHNFTVDMVDTLFKYSKFMYECGNYTVASVCLYYYRNLVNQADPNYLNALYGKLASEILLQEWEHARDDLLKLRAYI-DANPFDTEWELVTQRAWLMHWALFVYYNYPKGRDEIIEMFLNQQPYLNAIQVLA 250
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_MONBE (Eukaryotic translation initiation factor 3 subunit E OS=Monosiga brevicollis GN=13685 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.220e-37 Identity = 85/250 (34.00%), Postives = 141/250 (56.40%), Query Frame = 1 Query: 103 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQTNA 849 MA +DLTQ I NLD HL+ PLL+ + +Y + + ++K+++L++T +++ A+++ + TE +D+ R + K E++ P+ +N + A +L + Y + + LY +KF F+ G Y A LY YRA+ T+ + + +ALWGK+AA IL NW A E++ L E +D K+ + + Q+Q R WL+HWSLF+FFN +G I+DLF +++ NA+QT A Sbjct: 1 MAAHDLTQAICQNLDPHLILPLLDHCVDLDIYNEADLKRAKMQVLSRTRLIEQALELADA---TEK--KDLDARMRSISEEEKTWEKQLEPVFEMFENDEVLSIIEATKNKDSLLSELEPYGFTENTADLLYHGSKFYFDRGQYDLAHGLLYNYRAVSTDDKLKFTALWGKLAAAILSGNWQTAQEDMYLLLEYIDGGKNELTAVEQLQQRNWLLHWSLFVFFNQPDGPDGIVDLFMNKETCTNAMQTIA 245
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_DICDI (Eukaryotic translation initiation factor 3 subunit E OS=Dictyostelium discoideum GN=eif3e PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.548e-30 Identity = 78/291 (26.80%), Postives = 152/291 (52.23%), Query Frame = 1 Query: 112 YDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFL----QNPNSFQDLRANDQHYNLQMLNDRY----------------------------------------QIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCT---NSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLFHQDKYLNAIQT 843 YDLT++I LD H++ PL+ +L++ Q Y + +I K+ ++L++T DYA++ ++S+ + P + ++ E+V L L+E+ + + ++ Q ++L+ + + D+ +I P+ ++++Y+++K FE G Y A ++L + L N ++RLSALWG + ++IL NW A+ +++ L++++D S +P+ Q+ R WL+H +LF++F + R+ ++DL +DKYLNAIQT Sbjct: 3 YDLTKQICSFLDAHMMLPLINYLKDTQQYQENEINKAMADILSQTGCCDYAINAYESIGR-DTAP--LQAKKQELVGELNKLKEQCSFVTQYIESKKQQKEQQKELKEQQKEQQKEKDTDKTTPTTTDETTTTTTTAPTTTTTTTTTTITPITVIPFSQLLEKITPEILDSIYRFSKLLFEIGQYGSAREHLEIFLQLSPTHQNKDKRLSALWGILESDILSLNWGQAVGDISPLQDQID---SNGTPVEQLGQRAWLIHRALFVYFYNPESRSSLVDLLLEDKYLNAIQT 287
BLAST of CN186276 vs. ExPASy Swiss-Prot
Match: EIF3E_CAEBR (Eukaryotic translation initiation factor 3 subunit E OS=Caenorhabditis briggsae GN=eif-3.E PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.039e-23 Identity = 54/126 (42.86%), Postives = 85/126 (67.46%), Query Frame = 1 Query: 478 DQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-HQDKYLNAIQTNA 849 D ++ L++Y+KF +ECGNY+ A+ LY YR L ++ L+AL+GK+A+EIL+Q W+ A ++L +L+ +D F + + R WLMHW+LF+++N+ GR II++F +Q YLNAIQ A Sbjct: 5 DMVDTLFKYSKFMYECGNYTVASVCLYYYRNLVNQADPNYLNALYGKLASEILLQEWEHARDDLLKLRAYID-ANPFDTEWELVTQRAWLMHWALFVYYNYPKGRDEIIEMFLNQQPYLNAIQVLA 129 The following BLAST results are available for this feature:
BLAST of CN186276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186276 ID=CN186276; Name=CN186276; organism=Citrus sinensis; type=EST; length=851bpback to top |