CX674772

Overview
NameCX674772
Unique NameCX674772
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: ACON_FRATH (Aconitate hydratase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=acn PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.267e-19
Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  554 GKFYSLPALND------PRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            GK YSL +L          + +LPYSIR+LLE+ +RN D ++VK++D+ K++DW+  A  + EIP  PARV++QDFTGVPAVVDLA MR A
Sbjct:   16 GKKYSLYSLKKLSQELGKDVTRLPYSIRVLLENQLRNIDGYKVKEDDMHKVLDWDAKASSRPEIPHMPARVVMQDFTGVPAVVDLAAMRKA 106          
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: IREB2_XENLA (Iron-responsive element-binding protein 2 OS=Xenopus laevis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.951e-18
Identity = 46/104 (44.23%), Postives = 66/104 (63.46%), Query Frame = 2
Query:  497 EHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            E+PF  ++  L    G     F+++  L     + LPY IR++LE+ +RNCD   VK++D   I++W+     + EIPF PARV+LQDFTG+PA+VD A MRDA
Sbjct:    3 ENPFHYLVETL---SGTSDKTFFNVSKLKATEYDSLPYCIRVVLEAVVRNCDGVLVKEQDAFNILNWKTKCEFK-EIPFLPARVMLQDFTGIPAMVDFAAMRDA 102          
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: IREB2_XENTR (Iron-responsive element-binding protein 2 OS=Xenopus tropicalis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.186e-17
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 2
Query:  497 EHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            E+PF  ++  L    G     F+++  L     + LPY IR++LE+ +RNCD   VK++D   I++W+ +   + EIPF PARV+LQDFTG+PA+VD A MRDA
Sbjct:    3 ENPFHYLVEPL---SGTSDKTFFNVSKLKATEYDSLPYCIRVVLEAVVRNCDGVLVKEQDAFNILNWKATCEFK-EIPFLPARVMLQDFTGIPAMVDFAAMRDA 102          
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: ACON_COREF (Aconitate hydratase OS=Corynebacterium efficiens GN=acn PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.685e-17
Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 2
Query:  560 FYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            +Y+L A+  P +EKLPYS+++L E+ +R  D   + +E +E I +W+ SA   +EI F PARVL+QDFTGVP VVDLA MR+A
Sbjct:   23 YYALSAV--PGMEKLPYSLKVLGENLLRTEDGANITEEHIEAIANWDASADPSIEIQFTPARVLMQDFTGVPCVVDLATMREA 103          
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: ACON_BRAJA (Aconitate hydratase OS=Bradyrhizobium japonicum GN=acnA PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.236e-16
Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 2
Query:  560 FYSLPALND---PRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            +YSLP         I KLPYS+++LLE+ +RN D   VKK D+  +  W      + EI F+PARVL+QDFTGVPAVVDLA MR+A
Sbjct:   22 YYSLPTAEKNGLKGISKLPYSMKVLLENLLRNEDGRSVKKADIVAVSKWLRKKSLEHEIAFRPARVLMQDFTGVPAVVDLAAMRNA 107          
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: ACON_MYCAV (Aconitate hydratase OS=Mycobacterium avium GN=acn PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.920e-16
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 2
Query:  542 GGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            G +  + Y L A+  P  EKLPYS+++L E+ +RN D   + K+ +E I +W+  A   +EI + PARV++QDFTGVP +VDLA MR+A
Sbjct:   44 GDKSYQIYRLDAV--PNTEKLPYSLKVLAENLLRNEDGSNITKDHIEAIANWDPKAGASIEIQYTPARVVMQDFTGVPCIVDLATMREA 130          
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: ACON_STRMU (Aconitate hydratase OS=Streptococcus mutans GN=acn PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.814e-16
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 2
Query:  584 DPRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            D  ++ LPY+I+ILLES +R  D+  V K ++E +  + + AP Q E+PFKP+RV+LQDFTGVP VVDLA MRDA
Sbjct:   28 DIELDSLPYTIKILLESLLRKHDDICVTKNNIETLFHYNSKAP-QGEVPFKPSRVILQDFTGVPVVVDLASMRDA 101          
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: ACON_CORGL (Aconitate hydratase OS=Corynebacterium glutamicum GN=acn PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 2
Query:  560 FYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            +++L A+  P +EKLPYS+++L E+ +R  D   +  E +E I +W+ S+   +EI F PARVL+QDFTGVP VVDLA MR+A
Sbjct:   23 YFALSAV--PGMEKLPYSLKVLGENLLRTEDGANITNEHIEAIANWDASSDPSIEIQFTPARVLMQDFTGVPCVVDLATMREA 103          
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: ACON_STAES (Aconitate hydratase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=acnA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 2
Query:  545 GEFGKFYSLPALNDP---RIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            G+   +Y L  L +    +I KLPYSIR+LLES +R  D+F +  + ++ +  + N A  + E+PFKP+RV+LQDFTGVPAVVDLA +R A
Sbjct:   17 GQSYTYYDLQTLEEKGLAKISKLPYSIRVLLESVLRQEDDFVITDDHIKALSKFGN-AGNEGEVPFKPSRVILQDFTGVPAVVDLASLRKA 106          
BLAST of CX674772 vs. ExPASy Swiss-Prot
Match: ACON_STAEQ (Aconitate hydratase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=acnA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 2
Query:  545 GEFGKFYSLPALNDP---RIEKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDA 808
            G+   +Y L  L +    +I KLPYSIR+LLES +R  D+F +  + ++ +  + N A  + E+PFKP+RV+LQDFTGVPAVVDLA +R A
Sbjct:   17 GQSYTYYDLQTLEEKGLAKISKLPYSIRVLLESVLRQEDDFVITDDHIKALSKFGN-AGNEGEVPFKPSRVILQDFTGVPAVVDLASLRKA 106          
The following BLAST results are available for this feature:
BLAST of CX674772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ACON_FRATH1.267e-1952.75Aconitate hydratase OS=Francisella tularensis subs... [more]
IREB2_XENLA6.951e-1844.23Iron-responsive element-binding protein 2 OS=Xenop... [more]
IREB2_XENTR1.186e-1744.23Iron-responsive element-binding protein 2 OS=Xenop... [more]
ACON_COREF7.685e-1751.81Aconitate hydratase OS=Corynebacterium efficiens G... [more]
ACON_BRAJA2.236e-1652.33Aconitate hydratase OS=Bradyrhizobium japonicum GN... [more]
ACON_MYCAV2.920e-1646.07Aconitate hydratase OS=Mycobacterium avium GN=acn ... [more]
ACON_STRMU3.814e-1656.00Aconitate hydratase OS=Streptococcus mutans GN=acn... [more]
ACON_CORGL6.506e-1649.40Aconitate hydratase OS=Corynebacterium glutamicum ... [more]
ACON_STAES2.472e-1548.35Aconitate hydratase OS=Staphylococcus epidermidis ... [more]
ACON_STAEQ2.472e-1548.35Aconitate hydratase OS=Staphylococcus epidermidis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_8F02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-8F02-L4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674772 ID=CX674772; Name=CX674772; organism=Citrus sinensis; type=EST; length=809bp
GCCCTCTCACTCTCTCTCTTTCATCTAAAAATAACAGAACAGAAGACGCC
ATGAATTGAAAGAGCATTATTGCCATCAACCAACCAATAATCAAATCCAT
CTGAGACTCTGTACCAAATCCTTATCTCTTTTTTTGGCCTTTCCGTTTTG
TGTGAATGCGTGATCCAAGACATATACGTACCTCGCCATCGTCATGTATA
TAACAACCTCCACCTCAGCAGCTTCTTCAATCCTCAGAGCTTCTTCTAGG
TCACGATTCGTCTCTTCGCTATCTTCATTTAAGTCCTTACCTGCACGTTC
TCTTTCTCCTTCTCCTTCATCGTTGGTCTCTCAGCGATCTCTCGGCTTCG
CCTCGGCCGTTCGATCCTTCCGCTGCTCCGTCCCTCGCTGGAGCCACCGC
GTTGACTGGCGCTCTCCGCTTAGTCTTCGCGCTCAGATCAGAACCGTTGC
TCCTGCCATCGAACGGCTCGAACGCGCCTTTGCTACTATGGCTGCTGAAC
ATCCATTCAAGGAGATCTTGACCGCTCTTCCAAAGCCAGGAGGTGGCGAG
TTTGGAAAGTTCTATAGCCTTCCTGCACTCAATGATCCAAGAATTGAGAA
GCTGCCATACTCTATCAGAATCCTGCTTGAATCTGCTATTCGTAATTGTG
ACAACTTTCAAGTTAAGAAGGAAGATGTCGAGAAAATTATTGACTGGGAA
AATTCTGCACCAAAGCAAGTTGAAATTCCCTTCAAGCCTGCTCGTGTATT
GTTGCAGGATTTTACTGGAGTACCAGCCGTGGTTGACCTTGCCTGCATGC
GTGATGCTA
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