CX674750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.233e-31 Identity = 60/80 (75.00%), Postives = 74/80 (92.50%), Query Frame = -1 Query: 462 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEG 701 DPNKPKRP SAFFVFMEEFR+ + K+HP+NK+V+AVGKA G KWK+MS+A+KAPYVAK+EKRKVEYEK+M+ YN++QAEG Sbjct: 40 DPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEG 119
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.425e-28 Identity = 55/80 (68.75%), Postives = 70/80 (87.50%), Query Frame = -1 Query: 462 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEG 701 DPNKPKRP SAFFVFME+FR+ YK+ HP NKSVA VGKAGG+KWK ++ A+KAP+++KAEKRK EYEK+++ YN++QA G Sbjct: 32 DPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG 111
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.275e-26 Identity = 55/76 (72.37%), Postives = 65/76 (85.53%), Query Frame = -1 Query: 474 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 701 DPNKPKRP SAFFVFM +FREQYKKDHP NKSVAAVGKA GE+WKS+SE +KAPYV +A K+K EYE ++ YN++ Sbjct: 41 DPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKK 116
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.069e-26 Identity = 54/82 (65.85%), Postives = 68/82 (82.93%), Query Frame = -1 Query: 456 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTK 701 DPNKPKR SAFFVFMEEFR+++K+ +PKNKSVAAVGKA G++WKS+SE+DKAPYVAKA K K+EY K + YN+ ++ K Sbjct: 37 DPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAK 118
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.248e-24 Identity = 53/78 (67.95%), Postives = 65/78 (83.33%), Query Frame = -1 Query: 468 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQA 701 DPNKPKR SAFFVFM EFRE++K+ +PKNKSVAAVGKA GE+WKS+SE++KAPYVAKA K K EY K + YN+ ++ Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGES 115
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: HMGT_ONCMY (High mobility group-T protein OS=Oncorhynchus mykiss PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.885e-13 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -1 Query: 474 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 701 DPN PKRP+SAFF+F +FR Q K + P S+ V K GEKW +++ DK PY KA + K +YEKD+ Y + Sbjct: 90 DPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNK 164
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: HMGB3_MOUSE (High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.921e-13 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -1 Query: 474 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 701 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++S+ +K PYV KA K K +YEKD+ +Y + Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSK 163
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: HMGB3_HUMAN (High mobility group protein B3 OS=Homo sapiens GN=HMGB3 PE=1 SV=4) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 474 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 701 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++++++K PY+ KA K K +YEKD+ +Y + Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSK 163
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: HMGB3_BOVIN (High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 474 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 701 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++S+++K PY+ KA K K +YEKD+ +Y + Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYKSK 163
BLAST of CX674750 vs. ExPASy Swiss-Prot
Match: HMGB3_CHICK (High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.096e-12 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -1 Query: 474 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 701 DPN PKRP SAFF+F EFR + K +P S+ V K GE W ++S+ +K PY KA K K +YEKD+ +Y + Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSK 163 The following BLAST results are available for this feature:
BLAST of CX674750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674750 ID=CX674750; Name=CX674750; organism=Citrus sinensis; type=EST; length=788bpback to top |