EY665447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.654e-14 Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 223 AGTRSVSVSAAAA------DPNRPLWF-PGST-PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL-TKLGI-LNTPSWYTAGEQ 510 AGT+ + A + P+R W P ST P +L G PGD+G+D GL +DPET + + E++H RWA+LGA GI PELL T G+ P W+ AG Q Sbjct: 22 AGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQ 127
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.654e-14 Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 298 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG Q Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 132
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.654e-14 Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 298 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG Q Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 136
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.691e-14 Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PEL + G+ W+ AG Q Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQ 137
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.135e-13 Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 283 FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 F G TP +L+G GD+G+D GL SDPET N + E++H RWAMLGA G PELL K G+ W+ AG Q Sbjct: 64 FSGETP-SYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 139
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13 Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 265 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 P+RP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+ W+ AG Q Sbjct: 50 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQ 134
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13 Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 265 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 P+RP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+ W+ AG Q Sbjct: 50 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQ 134
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13 Identity = 37/85 (43.53%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 265 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 P+RP + P +L G PGD+G+D + +DPET N + E++HCRWAMLGA G PELL K G+ W+ AG Q Sbjct: 53 PDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQ 137
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13 Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL+K G+ W+ AG Q Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQ 135
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.936e-13 Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 265 PNRPLWF-PGSTP-PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 P+RP + P S P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL K G+ W+ AG Q Sbjct: 52 PDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQ 136 The following BLAST results are available for this feature:
BLAST of EY665447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665447 ID=EY665447; Name=EY665447; organism=Citrus sinensis; type=EST; length=857bpback to top |