EY665447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.256e-61 Identity = 124/211 (58.77%), Postives = 141/211 (66.82%), Query Frame = 1 Query: 139 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQEXXXXXXXXXXXXDDIHRLGRGEEGGPTL*SQAV*TLDPIFPKNKLTGTECWVTQGGLWFDPIGLGIRVPPKKVMELED*GRIKKGK 771 QK+ S+ GATKASF A G+RSV+VSA AADP+RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE+L+WN Q+E+VH RWAMLGAAGIFIPE LTK+G+LNTPSWYTAGEQE + G + V T DPIFP NKLTGT+ GGLWFDP+G G P K+ EL IK G+ Sbjct: 21 QKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNT-DPIFPNNKLTGTDVGY-PGGLWFDPLGWG-SGSPAKIKELRT-KEIKNGR 227
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 4.867e-57 Identity = 118/211 (55.92%), Postives = 134/211 (63.51%), Query Frame = 1 Query: 139 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQEXXXXXXXXXXXXDDIHRLGRGEEGGPTL*SQAV*TLDPIFPKNKLTGTECWVTQGGLWFDPIGLGIRVPPKKVMELED*GRIKKGK 771 +++ S+ G TKASF T RS + AADP+RPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPE+LRWN Q+E+VHCRWAMLGAAGIFIPELLTK+GILNTPSWYTAGEQE + G + V T DPIFP NKLTGT+ GGLWFDP+G G P K+ EL IK G+ Sbjct: 21 RRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNT-DPIFPNNKLTGTDVGY-PGGLWFDPLGWG-SGSPAKIKELRT-KEIKNGR 227
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.429e-24 Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 280 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQE 513 W PG P +L GSLPGD GFDPLGL DPE LRW VQ+E+V+ RWAMLG AG+ +PE+ T +GI+N P WY AG++E Sbjct: 56 WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEE 133
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.438e-24 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 235 SVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQE 513 S S+ + + W PG P++L GSL GD GFDPLGL DPE L+W VQ+E+V+ RWAMLG AG+ +PE+ TK+GI+N P WY AG+++ Sbjct: 42 SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQ 134
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21 Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 232 RSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSW 492 R V+V A + W PG P +LDGSL GD GFDPL L DPE LRW VQ+++V+ RWAMLG AG+ IPE+LTK G++N P W Sbjct: 26 RDVAVQAKGS------WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEW 106
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.816e-18 Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 154 VAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGST------PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAG 504 ++G K+S + +R + V AAAA P + W P PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAML GIF+ + T + W+ AG Sbjct: 19 LSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKS-WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGI------PWFEAG 134
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.191e-16 Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 244 VSAAAADPNRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAG 504 V+AAA P + W P PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ AG Sbjct: 44 VAAAAVAPKKS-WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAG 129
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.069e-15 Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 1 Query: 223 AGTRSVSVSAAAADPNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 A + VS S+ +R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q Sbjct: 39 AKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQ 137
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.702e-15 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 223 AGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 A T+ ++ SA+ + P+R L+ F G PP +L G PGD+G+D GL +DPE N + E++HCRWAMLGA G PELL + G+ W+ AG Q Sbjct: 44 ATTKKLTASASTSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQ 145
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.528e-15 Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 223 AGTRSVSVSAAAADPNRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAG 504 A + +V AAAA + W P PEWLDGSLPGD+GFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ AG Sbjct: 39 ATPKRFTVLAAAAKKS---WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAG 129 The following BLAST results are available for this feature:
BLAST of EY665447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665447 ID=EY665447; Name=EY665447; organism=Citrus sinensis; type=EST; length=857bpback to top |